Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g00805 | ATGAGGAATTCCCGCGTGGAACTTGGGAGGCCTGCCTCAGGGGAGCCTTATTGCCTTGTAACCGTGTGGCCGCAAGGTTACCGATTCAAGTCAGCCACAGATGCTTGCAATAGGTCAGCCAATATTGGAGTATTTGTTTGCTTAAAATGTTGTGGTGTGCACAGAAGCCTTGGTTCTCATATATCAAAGATTTTATCTGTGACTTTGGATGAATGGACAGAAGAAGAAATTGATTCAATGATTGAAGTTGGGGGGAATGCTGCTGCTAATTCAATATATGAGGCTTATATTCCAGAAGGACATAAAAAACCTGAACCAGATGCCAGCCATGAACAGCGTGCAAATTTTATAGTGTCAAAATATGAGAATCAAGAATTTTTGAAACCTGGCTTGCGCATTGTGTCTGGGAAAGGCGGTCCAAATTCAAACTCCGCAAAAAGTCGCATCGATGGTGGTAGTTCAAAGAGAACGGAAGGTATGGTGGAATTTATTGGAATGTTGAAGGTGAAAGTGATTAGAGGCACCAATTTAGCTATTAGAGATATAAAGACAAGTGATCCATATGTTGTTTTGAACCTTGGCACACAGACTTCCCAGACAAGGGTAATATCGAGTAACTTGAATCCAGTCTGGAATGAAGAAATTATGTTGTCTGTTCCTGAAATATATGGACCAATAAAACTGAAAGTGTTCGATTATGACACATTTTCTGCTGACGACATAATGGGAGAAGCAGACATTGACATTCAGCCCCTGATATCATCTGCCATGGCATGTGGTAATGCTGCAATGTTTGCCAATATGCAGATAGGAAAGTGGTTAAAAGCTGATGGGAATGCACTTATTGAAGATAGTATAGTCAATATTGTTGATGGGAAGGTTATACAGGCCATGACACTGAAGCTCCAGAATGTTGAATGTGGAGAAATAGACCTAGAAATTGAGTGGATCCCTCTTGATCAATAG | 966 | 0.4089 | MRNSRVELGRPASGEPYCLVTVWPQGYRFKSATDACNRSANIGVFVCLKCCGVHRSLGSHISKILSVTLDEWTEEEIDSMIEVGGNAAANSIYEAYIPEGHKKPEPDASHEQRANFIVSKYENQEFLKPGLRIVSGKGGPNSNSAKSRIDGGSSKRTEGMVEFIGMLKVKVIRGTNLAIRDIKTSDPYVVLNLGTQTSQTRVISSNLNPVWNEEIMLSVPEIYGPIKLKVFDYDTFSADDIMGEADIDIQPLISSAMACGNAAMFANMQIGKWLKADGNALIEDSIVNIVDGKVIQAMTLKLQNVECGEIDLEIEWIPLDQ | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g00805 | 321 | Pfam | C2 domain | 166 | 258 | IPR000008 | - | |
Aip04g00805 | 321 | PRINTS | HIV Rev interacting protein signature | 64 | 85 | IPR001164 | GO:0005096 | |
Aip04g00805 | 321 | PRINTS | HIV Rev interacting protein signature | 43 | 60 | IPR001164 | GO:0005096 | |
Aip04g00805 | 321 | MobiDBLite | consensus disorder prediction | 131 | 154 | - | - | |
Aip04g00805 | 321 | Pfam | Putative GTPase activating protein for Arf | 39 | 128 | IPR001164 | GO:0005096 | |
Aip04g00805 | 321 | ProSiteProfiles | C2 domain profile. | 150 | 262 | IPR000008 | - | |
Aip04g00805 | 321 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 39 | 126 | IPR001164 | GO:0005096 | |
Aip04g00805 | 321 | SMART | arf_gap_3 | 27 | 134 | IPR001164 | GO:0005096 | |
Aip04g00805 | 321 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 39 | 128 | IPR037278 | - | |
Aip04g00805 | 321 | SMART | C2_3c | 166 | 261 | IPR000008 | - | |
Aip04g00805 | 321 | Gene3D | Arf GTPase activating protein | 31 | 131 | IPR038508 | - | |
Aip04g00805 | 321 | CDD | ArfGap | 39 | 121 | - | - | |
Aip04g00805 | 321 | CDD | C2_ArfGAP | 164 | 308 | - | - | |
Aip04g00805 | 321 | Gene3D | C2 domain | 163 | 321 | IPR035892 | - | |
Aip04g00805 | 321 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 32 | 321 | IPR044518 | GO:0005096|GO:0005543 | |
Aip04g00805 | 321 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 | 32 | 321 | - | - | |
Aip04g00805 | 321 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 163 | 319 | IPR035892 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g00805 | Aip-Chr4 | 10525808 | 10530117 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g00805 | 1 | 321 | C2H2 Transcription Factor Family | AT4G05330 | 63.393 | 5.30e-149 | 420 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g00805 | K12486 | - | gmx:100810806 | 444.891 |