Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00805 ATGAGGAATTCCCGCGTGGAACTTGGGAGGCCTGCCTCAGGGGAGCCTTATTGCCTTGTAACCGTGTGGCCGCAAGGTTACCGATTCAAGTCAGCCACAGATGCTTGCAATAGGTCAGCCAATATTGGAGTATTTGTTTGCTTAAAATGTTGTGGTGTGCACAGAAGCCTTGGTTCTCATATATCAAAGATTTTATCTGTGACTTTGGATGAATGGACAGAAGAAGAAATTGATTCAATGATTGAAGTTGGGGGGAATGCTGCTGCTAATTCAATATATGAGGCTTATATTCCAGAAGGACATAAAAAACCTGAACCAGATGCCAGCCATGAACAGCGTGCAAATTTTATAGTGTCAAAATATGAGAATCAAGAATTTTTGAAACCTGGCTTGCGCATTGTGTCTGGGAAAGGCGGTCCAAATTCAAACTCCGCAAAAAGTCGCATCGATGGTGGTAGTTCAAAGAGAACGGAAGGTATGGTGGAATTTATTGGAATGTTGAAGGTGAAAGTGATTAGAGGCACCAATTTAGCTATTAGAGATATAAAGACAAGTGATCCATATGTTGTTTTGAACCTTGGCACACAGACTTCCCAGACAAGGGTAATATCGAGTAACTTGAATCCAGTCTGGAATGAAGAAATTATGTTGTCTGTTCCTGAAATATATGGACCAATAAAACTGAAAGTGTTCGATTATGACACATTTTCTGCTGACGACATAATGGGAGAAGCAGACATTGACATTCAGCCCCTGATATCATCTGCCATGGCATGTGGTAATGCTGCAATGTTTGCCAATATGCAGATAGGAAAGTGGTTAAAAGCTGATGGGAATGCACTTATTGAAGATAGTATAGTCAATATTGTTGATGGGAAGGTTATACAGGCCATGACACTGAAGCTCCAGAATGTTGAATGTGGAGAAATAGACCTAGAAATTGAGTGGATCCCTCTTGATCAATAG 966 0.4089 MRNSRVELGRPASGEPYCLVTVWPQGYRFKSATDACNRSANIGVFVCLKCCGVHRSLGSHISKILSVTLDEWTEEEIDSMIEVGGNAAANSIYEAYIPEGHKKPEPDASHEQRANFIVSKYENQEFLKPGLRIVSGKGGPNSNSAKSRIDGGSSKRTEGMVEFIGMLKVKVIRGTNLAIRDIKTSDPYVVLNLGTQTSQTRVISSNLNPVWNEEIMLSVPEIYGPIKLKVFDYDTFSADDIMGEADIDIQPLISSAMACGNAAMFANMQIGKWLKADGNALIEDSIVNIVDGKVIQAMTLKLQNVECGEIDLEIEWIPLDQ 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00805 321 Pfam C2 domain 166 258 IPR000008 -
Aip04g00805 321 PRINTS HIV Rev interacting protein signature 64 85 IPR001164 GO:0005096
Aip04g00805 321 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Aip04g00805 321 MobiDBLite consensus disorder prediction 131 154 - -
Aip04g00805 321 Pfam Putative GTPase activating protein for Arf 39 128 IPR001164 GO:0005096
Aip04g00805 321 ProSiteProfiles C2 domain profile. 150 262 IPR000008 -
Aip04g00805 321 ProSiteProfiles ARF GTPase-activating proteins domain profile. 39 126 IPR001164 GO:0005096
Aip04g00805 321 SMART arf_gap_3 27 134 IPR001164 GO:0005096
Aip04g00805 321 SUPERFAMILY ArfGap/RecO-like zinc finger 39 128 IPR037278 -
Aip04g00805 321 SMART C2_3c 166 261 IPR000008 -
Aip04g00805 321 Gene3D Arf GTPase activating protein 31 131 IPR038508 -
Aip04g00805 321 CDD ArfGap 39 121 - -
Aip04g00805 321 CDD C2_ArfGAP 164 308 - -
Aip04g00805 321 Gene3D C2 domain 163 321 IPR035892 -
Aip04g00805 321 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 32 321 IPR044518 GO:0005096|GO:0005543
Aip04g00805 321 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 32 321 - -
Aip04g00805 321 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 163 319 IPR035892 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip04g00805 Aip-Chr4 10525808 10530117 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00805 1 321 C2H2 Transcription Factor Family AT4G05330 63.393 5.30e-149 420
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00805 K12486 - gmx:100810806 444.891