Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00796 ATGAAGCTCCTCTATGTTTTCTTATTGTCTCTGGTTCTCTGTATTGTGCCTCCAACTCTTAGAGCACAATTAGATTCTCTTTTCTATAAACGTACTTGTTCTTCTCTTCATTCAATTGTTCATCAAGTTCTTTACAATGTCTCCAAAGGGCCTGCAAAAGATAAGCGATTGTTTGCTAGTTTGATCAGACTTGCCTACCATGATTGTTTTGTACAAGGATGTGATGCTTCAATTCTATTGAATGATACAGCTGCCATAAGGAGTGAACAACTTGCACCTCCAAATATCAACTCCGTTCGAAGATTGGATGTTGTGAATTTGATTAAGAAAAAGATTGAAAAAACTTGTCCTGGTGTTGTTTCCTGTGTTGACATTCTTGCACTTGCAGCCGAAATATCTTCTGAGATATTTAAAGTTCCAAATTTGCAAGTTCCATTAGGAAAAAGGGATAATATAACAGCAAACTTCGACCTGACAACTTCGGATATTCTGGGTCCAACCTCCAACCTCCCTCAACTGATTTACAAATTTGAGAAGAAAGATCTCGATGTTAATGATTTAGTGGCACTCTCAGTGCTCATACAATCGGTCAAGGACGATGTGTACTTTCCCGCCTTCCAAACTGCACAAATGATGGGTCACCTGGGGAAAATATTACAAACTTGGACCCGATAA 675 0.3867 MKLLYVFLLSLVLCIVPPTLRAQLDSLFYKRTCSSLHSIVHQVLYNVSKGPAKDKRLFASLIRLAYHDCFVQGCDASILLNDTAAIRSEQLAPPNINSVRRLDVVNLIKKKIEKTCPGVVSCVDILALAAEISSEIFKVPNLQVPLGKRDNITANFDLTTSDILGPTSNLPQLIYKFEKKDLDVNDLVALSVLIQSVKDDVYFPAFQTAQMMGHLGKILQTWTR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00796 224 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 ProSiteProfiles Plant heme peroxidase family profile. 23 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 SUPERFAMILY Heme-dependent peroxidases 23 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 Gene3D Peroxidase, domain 2 164 191 - -
Aip04g00796 224 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 Pfam Peroxidase 51 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 Gene3D - 28 163 - -
Aip04g00796 224 PANTHER PEROXIDASE 72-RELATED 10 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00796 224 PANTHER PEROXIDASE FAMILY PROTEIN 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00796 Aip-Chr4 10367457 10368413 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00796 6 191 Peroxidase AT5G06720 46.277 2.54e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00796 K00430 - gmx:547499 194.512