Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00793 ATGAAGTTTCTGTTTCTTTTCTTATTCCCTTTGATTTTGTGTGTTGTGGTTCCTACCACCAGAGCACAATTATTAGATCCATTCTTTTACAAAGATACATGTCCCTCTCTCCAGTCAACTGTACGACAAGTTCTTCTTAATGTTTCGAAGGGGCCTGGAAAAGATGAGCGGCTTTTCGCCAGCTTGATAAGACTTCATTTCCACGATTGCTTCGTCCAAGGGTGTGATGGATCAATTTTGTTAAATGATACCGCTTCTATTAGAAGCGAACAACTTGCAGCGCCGAATCTGGACTCCATTCGTAGGTTGGATGTGATCAATTTGATTAAGGAAAATATCGAGAAAGCTTGTCCTGGGGTTGTTTCCTGCGCTGATATTGTCGCACTTGCTGCCGAAGTGTCTTCGGAGATGTCAAATGGTCCAACTTGGCAAGTTCCCTTGGGCAGAAGAGATAGTGAAACAGCAAGCTTCGACTTGGCAAATTCGGACATTCCTGGTCCAAAATCCAACCTCCCTCAGCTCATTTCGGCATTTCAGAAAAAGGGTCTTGATATGAATGATTTAGTGGCACTTTCAGGTGCTCACACAATTGGCAGAGGACGGTGTACACTTTCCCGTCGCCGAAACTGCAAAAATAATGGGTCAAAGGGAGAAAATGTCACAAATTTGGACCAGATAACTGCTTTTGAGTTTGATAATAATTATTATATAAATCTTCAGCGTGGTGATGGACCCTTTAACAGCGATCAAGTGCTGTTTGATACAAGGGGTGCACAGACAATCAATGCAATCAATCTAAAGCATTATCATTTGGAACTATCTGAACCTGAGAAAACTCTTCTTCTTCTCCGGCTTCATGCTTCATCTTTCATCATTGGAATGGTATCCTCATTCACCCACCGCCAATACCCACTCCAATACGCTGCTCCTGCAACTATGCTAGGACTCCATCTGGATCTGGTGCGTCGAAGATTACGATCATCCCTTCCAAACTGA 996 0.4307 MKFLFLFLFPLILCVVVPTTRAQLLDPFFYKDTCPSLQSTVRQVLLNVSKGPGKDERLFASLIRLHFHDCFVQGCDGSILLNDTASIRSEQLAAPNLDSIRRLDVINLIKENIEKACPGVVSCADIVALAAEVSSEMSNGPTWQVPLGRRDSETASFDLANSDIPGPKSNLPQLISAFQKKGLDMNDLVALSGAHTIGRGRCTLSRRRNCKNNGSKGENVTNLDQITAFEFDNNYYINLQRGDGPFNSDQVLFDTRGAQTINAINLKHYHLELSEPEKTLLLLRLHASSFIIGMVSSFTHRQYPLQYAAPATMLGLHLDLVRRRLRSSLPN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00793 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Plant peroxidase signature 238 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PANTHER PEROXIDASE 11 206 - -
Aip04g00793 331 PANTHER PEROXIDASE 209 265 - -
Aip04g00793 331 Gene3D - 29 164 - -
Aip04g00793 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Aip04g00793 331 ProSiteProfiles Plant heme peroxidase family profile. 24 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 Gene3D Peroxidase, domain 2 165 206 - -
Aip04g00793 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PANTHER PEROXIDASE 72-RELATED 11 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 PANTHER PEROXIDASE 72-RELATED 209 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 CDD secretory_peroxidase 25 257 IPR033905 GO:0004601|GO:0042744
Aip04g00793 331 Pfam Peroxidase 51 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00793 331 Gene3D Peroxidase, domain 2 207 264 - -
Aip04g00793 331 SUPERFAMILY Heme-dependent peroxidases 25 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00793 Aip-Chr4 10246593 10249286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00793 6 261 Peroxidase AT5G06720 47.163 3.03e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00793 K00430 - gmx:106796332 274.633