Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00785 ATGAAGCAAACCAGACATAGAATTCTTGTTGGATGGCTTTTGCTCCCATTTCGTCCTCTCTTTGAAGTTCTTCTCCACCTTGGTTGTGATGCATCAATTTTGCTGAATAGCACAAGTACCATAGTGAGTGAACAAGGTGCAGGACCAAATAACAACTCAATAAGAGGCTTAGATGTTGTGAATCAGATCAAAACAGCGGTTGAAAATGCTTGTCCTGGTGTTGTTTCTTGTGCCGATATTCTTGCACTTGCTGCAGAAATTTCATCTGTTTTGGCTCATGGTCCTGATTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACTTTACCCTTGCTAATCAAAAACTTCCGGCTCCAACCTTCAATCTTAGTCAACTTATCTCTACTTTTGCCAATCAATCCCTCAACATAACTGATCTAGTTGCACTTTCAGGTGCTCACACAATTGGGAGAGCTCAATGTAGATTTTTCAGCAGTCGATTATACAATTTTAGCAACACTGGAAATCCTGATCCAACTTTGAACACAACCTATCTACAAACACTTAGATCAATTTGCCCCAATGGTGGACCAGGGAATACTCTCACCAATTTGGACTTAACAACCCCAGACACATTTGACAACAAATACTTCTCCAATCTTCAATCTCTAAATGGATTGCTTCAGAGTGATCAAGAACTTTTCTCTACAGTTGGTGCATCTACACTTAGCATTGTGAACAGTTTCAGCAGTAACCAAACTCTTTTCTTTGAAGCATTTAAGGCATCAATGATTAAGATGGGTAATATTGGAGTTCTAACTGGCTCTCAAGGTGAAATCAGAAAGCAATGTAACTTTGTTAATGGAAATTCTGGATTGGCTACTTTTGCTACTAGAGTAGAATCATCAGAACAACAGGGTGTTAGCTCAGCCTAA 921 0.3931 MKQTRHRILVGWLLLPFRPLFEVLLHLGCDASILLNSTSTIVSEQGAGPNNNSIRGLDVVNQIKTAVENACPGVVSCADILALAAEISSVLAHGPDWKVPLGRRDSLTANFTLANQKLPAPTFNLSQLISTFANQSLNITDLVALSGAHTIGRAQCRFFSSRLYNFSNTGNPDPTLNTTYLQTLRSICPNGGPGNTLTNLDLTTPDTFDNKYFSNLQSLNGLLQSDQELFSTVGASTLSIVNSFSSNQTLFFEAFKASMIKMGNIGVLTGSQGEIRKQCNFVNGNSGLATFATRVESSEQQGVSSA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00785 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 141 151 IPR019793 -
Aip04g00785 306 PRINTS Plant peroxidase signature 55 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 257 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 74 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 215 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 140 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 15 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 199 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Plant peroxidase signature 93 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Haem peroxidase superfamily signature 75 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Haem peroxidase superfamily signature 141 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PRINTS Haem peroxidase superfamily signature 93 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 ProSiteProfiles Plant heme peroxidase family profile. 17 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 PANTHER PEROXIDASE 7 291 - -
Aip04g00785 306 Gene3D - 27 283 - -
Aip04g00785 306 PANTHER PEROXIDASE 72-RELATED 7 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 CDD secretory_peroxidase 28 282 IPR033905 GO:0004601|GO:0042744
Aip04g00785 306 Gene3D Peroxidase, domain 2 119 262 - -
Aip04g00785 306 SUPERFAMILY Heme-dependent peroxidases 28 283 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip04g00785 306 Pfam Peroxidase 27 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00785 Aip-Chr4 10004077 10007291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00785 3 284 Peroxidase AT5G06720 62.057 8.73e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00785 K00430 - gmx:112997600 424.476