Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00776 ATGGATGTTTCTGCTGAAAATATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTGCATCCTGACAAGAACCCTGGTGATGAGGAGGCTAAAGCAAAATTTCAGCAACTACGAAATGTTATCACGATTCTTGGGGATGAAGAAAAGCGAGCCATTTATGATCAGATTGGTTGTGTTGATGATGCTGACCTTGCCGGGGATGTTGTCAAGAATCTTCACAACTACTTTAGAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAAAGTGCAGAAGTGTTTGTTTGGATTGGCCAGTCTGTGGACCCAAAAGAAAAACAAAATGCTTTTGAAATTGGCCAGAGCTATATAGATAAGGCTGTATCACTGGAGGGACTATCTCCTCGGGTTCAGGGAAACTCTTTCCAGAAAAAGGTGACATTACTCTTCGGGATTCGCCATGCTGTAGAGGAAAAGTCTAATGGGCCAAGTCAAGGGGGACCAAGACAAAGAGCTGAAGCTTTCTTTGCCTTGTCTAATGCCTTTAATTCATCTTCTGATATGACATCCAGTATGTCACAGAATAGATTGAATGGGCTGAATCAAGGAGGACCAAGACAAAGAGCAGAAACTTTGGCTGCTTTAAACTCTGCATTTAAATCATCATCCGGAACCAAAAGTTCTAGCCCTAAGACAACTGGAAGAAGTCAAGGATCACAAAGAGCAGCAGTAGTAGCTGCTCTCTCTCAAGTTCTTACTACTGAGAAGAAGAAACAATCACCTGATTCTTCTCCTGTGGCAACCAGAAGTCCTGTTGTGGAAACTAGCACTTCCATTCCACTACCATCGCCGCCACCCTTAATGTCTTCGGATGAGGACTATGATGATGATGAGGATGAAGATGACAATGAAGACTATAGCTGA 996 0.4257 MDVSAENMIFGVAGIDPERRAELIKVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLRNVITILGDEEKRAIYDQIGCVDDADLAGDVVKNLHNYFRTMYKKVTEADIEESAEVFVWIGQSVDPKEKQNAFEIGQSYIDKAVSLEGLSPRVQGNSFQKKVTLLFGIRHAVEEKSNGPSQGGPRQRAEAFFALSNAFNSSSDMTSSMSQNRLNGLNQGGPRQRAETLAALNSAFKSSSGTKSSSPKTTGRSQGSQRAAVVAALSQVLTTEKKKQSPDSSPVATRSPVVETSTSIPLPSPPPLMSSDEDYDDDEDEDDNEDYS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00776 331 CDD DnaJ 25 76 IPR001623 -
Aip04g00776 331 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Aip04g00776 331 MobiDBLite consensus disorder prediction 210 229 - -
Aip04g00776 331 MobiDBLite consensus disorder prediction 243 331 - -
Aip04g00776 331 MobiDBLite consensus disorder prediction 210 231 - -
Aip04g00776 331 SMART dnaj_3 21 79 IPR001623 -
Aip04g00776 331 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 21 121 IPR042977 -
Aip04g00776 331 Pfam DnaJ domain 25 84 IPR001623 -
Aip04g00776 331 MobiDBLite consensus disorder prediction 243 301 - -
Aip04g00776 331 PRINTS DnaJ domain signature 42 57 IPR001623 -
Aip04g00776 331 PRINTS DnaJ domain signature 59 79 IPR001623 -
Aip04g00776 331 PRINTS DnaJ domain signature 79 98 IPR001623 -
Aip04g00776 331 PRINTS DnaJ domain signature 24 42 IPR001623 -
Aip04g00776 331 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 21 121 - -
Aip04g00776 331 MobiDBLite consensus disorder prediction 314 331 - -
Aip04g00776 331 Gene3D DnaJ domain 17 97 IPR036869 -
Aip04g00776 331 SUPERFAMILY Chaperone J-domain 23 94 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00776 Aip-Chr4 9905183 9908356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00776 18 84 C2H2 Transcription Factor Family AT1G74250 38.889 3.50e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00776 - - pvu:PHAVU_001G131700g 229.565