Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00775 ATGGTTGCTGTTGAAGTATTCAACTTGGAGATACAACAAGCACCAAGAAGCTTTGATGCAGAATGCGAAGGGGTGCGAAATCTTTGCCATAGAAATCTTGTTAAAGTCATCAGAAGTTGCTCAAATTCCATTAATTTCAAGGCCTTGGTGATGGAATTTGTAGCAAATGGGAACTTGGAGAAGTGGTTGTATTCTCATAACTATTTCATACCGTTCATGCAAAGGTTGAAGGTAGTAATAGACGTTGCATGTGCATTGGAGTATCTACACCATGGTAACACTAGATCTGTGGTACATTGTGATCTGAAGCCAAGTAATGTTCTGTTGGATGAAGATATGGTTACACATGTTTGTGATTTCAACATTGCTAAACTATTAGAAGACGGCCAATCTGAAATCCATACAAACACCTTAGCCACCCTTGGTTTTACGGCTCCAGAGTATGGATTGGAAGGAATAGTGTCCCCAAAGGGAGATGTATACAGCTATGGTATTATGCTAATGGAAGTCTTCACAAGAAAGAAACCAACTGATGAAATGTTTTGTGAGGGACTAAGTTTAAGGTCATGGATCCAACAGTCATTGCCACGTGGGATAATTGAGGTTGTGGATCCTAATTTGATGGAGGGAGAGGAACAAGTTGTTTCTGCCATGGAAGTAGCCTTATCAAAAATCATGGACTTGGCTCTGGATCTCATGACTCTCCAAATGAGAGAATTAGTATGA 726 0.4008 MVAVEVFNLEIQQAPRSFDAECEGVRNLCHRNLVKVIRSCSNSINFKALVMEFVANGNLEKWLYSHNYFIPFMQRLKVVIDVACALEYLHHGNTRSVVHCDLKPSNVLLDEDMVTHVCDFNIAKLLEDGQSEIHTNTLATLGFTAPEYGLEGIVSPKGDVYSYGIMLMEVFTRKKPTDEMFCEGLSLRSWIQQSLPRGIIEVVDPNLMEGEEQVVSAMEVALSKIMDLALDLMTLQMRELV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00775 241 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 231 - -
Aip04g00775 241 Pfam Protein kinase domain 14 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00775 241 Gene3D Transferase(Phosphotransferase) domain 1 58 239 - -
Aip04g00775 241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Aip04g00775 241 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Aip04g00775 241 SUPERFAMILY Protein kinase-like (PK-like) 2 196 IPR011009 -
Aip04g00775 241 SMART serkin_6 2 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00775 241 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 231 - -
Aip04g00775 241 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00775 Aip-Chr4 9903239 9904070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00775 1 230 Receptor kinase-like Gene Family AT3G47090 38.956 2.38e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip04g00775 Pkinase 5.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00775 - K13420 lja:Lj6g3v0938090.1 344.354