Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00765 ATGGAGAAAGCTTCTTCCTTCTTTCTCATTCTTATCTTATCATCATGCCGTCATTTCATGGCTTCCTCAGACACAATCAAATCCAACAACAACAATGAAGACCAATCAGCACTTCTAGCCTTAAAATCTCACATCAATTTGGATCCTCAACACATGTTGTCCAATAATTGGTCCACCACTTTCCCCCTATGCAATTGGTTTGGTATCACTTGTGATGCAAATACAAGAAGGGTAACATCCTTAAATCTCACAAACATGAACTTAAATGGTACCCTTCCTTCTCAATTAGGGAACTTAACTTATCTTCTAAACCTTGATCTTCACAATAATAGCTTTAATGGTATTGTTCCAAAGGAATTGGCCTTGTTACCCAGATTGGAGGTTCTCAATTTGTGCACAAATAACTTTGGTGGTGAACTTCCACCATGGATTAGTGAGTTATCTAACCTCCAAAGTTTGAGTCTTTGTAACAATAGTTTTTCAGGGTCAATCCCTACTTCACTATCTAACTTGTCAAAGTTGAAGAGCTTGAATTTGACCTTTAATTTCATTAGTGGAAGCATTCCACATGAGCTTGGAAGGCTTCATAACCTGAGTGTTTTGGACTTGTCACACAATAAGTTATCTGCTGATATTCCTTCTTCAATCTTCAATATCTCCACACTCCAAGTCATTGATTTAGCCTATAATTCTTTGTCAGGAAGCATTCCTCAAAATGTTGGGAATGTATCACAATTAAGAAGTATAGATTTGAGCAAGAATGATCTTGTAGGCAACGTACCATTATCCTTTTTCAATATCTCAAATCTTGGGCAGATTAGATTCTCTTACAATAACCTAACTGGCTCTCTTCCATCGGATTTGTGCCTTGCGTTCCCAATGCTTGAATTTCTTGACCTCTCTGGAAATTCATTTTTCGGTGAAATTCCGTCAAGTTTGCATCAATGTTGGAAGCTCAAATTTCTGAATATGGACAACAATAGAATTTACGGACACCTACCAAGTGATATCGGCAGCTTATCTATGCTTCAAACCTTAAGTCTTAACAACAACAATTTAACAGGTTCACTTCCACAGTCTCTTTTCAACATCTCCAGTTTAAGACTAATAAACCTTCGGAACAACTTCTTTGGTGGTCAACTTCCTGAAGAGATGTGTGATCAAGCTCATTCCTTACAACACATTTCTATATTAAATAACAATGTTGGTGGCACCATTCCAAAGTCTATTGGCAACTGCACCTCATTAATAAACTTATATCTCGGAGCAAACTTTTTCACAGGTACAATACCCTATGAGATAGGTGACAAATTAAGAAAGCTTGAGATATTGCACTTACAAGGCAACAAACTAACAGGATCAATCCCTCCAAACATCTTCAACATCTCAGGACTACAAAGCCTCTCACTCTCAAACAACAATCTATCAGGAACTCTTCCAATTCAAGCACATCACACCCTCTCCAATCTCCAATTCCTCTACATTTCTGGGACCAACCTTAGTGGAGAAATTCCAACACCTCTTTTCAATGCTTCAATGCTACTTCAGCTAGTACTTGCCAACAGTTCCTTTTCAGGACCTATACCTGATTCATTTGGCAACTTGAGAAATCTCCAGGTCCTATATCTCTTGGGAAACAACTTCACTGGTGGTCTTGGTTTCCTCAATTCACTCACACAATGCAGGCAATTGACAAAGATTCTTTTAGCATCTAATCCCCTTGGTGGAACACTTCCAAACGCCATTGGAAATCTTTCACAATCTCTTCAAAGGTTTGATGTGAGGAGTTGTAACATCAAGGGTGAAATTCCTCCACAGATTGGAAACTTGAAGAACCTATATGATTTAAAGATGTATAACAACCAATTTGTAGGAGAGATTCCAAGCACAATTGGGAACTTACAGCTTCTTCAATTATTGGAACTTTCGAACAATAGGCTAAATAGCTCTATCCCAGAACAAATTTGCAGGATTCAGAATTTGAACCAGTTGATTCTTAGCAATAACAACATTTTTGGGCCAATTCCAAGATGTGTGGATCATCTTTCTTCTCTAAGAATACTTTACTTAGATTCCAACAACCTAAACTCCACAATACCTTCCACACTTTGGAGCCTCAGTTATATCTTGGAGGTAAATTTATCCTCCAATGGCCTTGAAGGGTCTTTGCCAGCTGAGATAAGTAGCATGAATGCTGTGATCAATTTGGATATTTCACATAACAAGCTTTCAGGAAAAATTCCCACTGGAATTGGTAGCTTGCAAAGAATATTGAATCTCTCATTAGCCTATAACATGTTACAAGGGCCTATTCCTGATTCAATTGGGAACATGTTGAGTTTGGAATTTCTTGATTTTTCCCATAATCTTTTATCAGGAACCATTCCTAAGTCCTTTGTGAACATTGTTGATCTCAAGTTTATAAACTTGTCTTATAATAGGCTACATGGTGAGATTCCTTATGGTGGCAAGTTTATAAATTTCAAACCTCAATCATTCATGATGAATGATGGACTCTGTGGAAGACCAAATTTTGGAGTCCCACCATGTTCCAATGATGGTGCAAAAAACAGTAGGAGATCCAAAGCTCTGAAATTGGCAATACCCTTAATTGTATTATGCATGATTCTTGCATGTGCAGTTATTTTGATATGCAGAAGAAAACCAAGAAAGGGTTCAGCTGCTGAAGACTTACCATCGTTTCAATTTCCAAGTCGAATTTCCTACTTTGAACTCTTGGAGGCAACACAGAAATTTGATGAGAGCAATCTTATTGGAAGAGGGGGTTTAGGTTCTGTTTTCAGAGGTGAGCTTTCAAATGGAACTGTGGTTGCTGTTAAAGTATTCAACTTGGAGATACAACAAGCACCAAGAAGCTTTGATGCAGAATGCGAAGCGATGCGAAATCTTCGCCATAGAAATCTTGTTAAAGTCATCAGCAGTTGCTCAAATTCCATTGATTTCAAGGCCTTGGTGATGGAATTTGTAGCAAATGGGAACTTGGAGAAATGGTTGTATTCTCATAACTATTGCCTACCATTCATGCAAAGGTTGAAGGTAGTAATAGACGTTGCATGTGCATTGGAGTATCTGCACCATGGTAACACTAGACCTGTGGTGCATTGTGATCTGAAGCCAAGTAATGTTCTGTTGGATGAAGATATGGTTGCACATGTTTGTGATTTCAACATTGCTAAACTATTGGAAGAAGATCAATCTGAAATCCATACAAACACCTTAGCCACCCTTGGTTATATGGCTCCCGAGTATGGATTGGAAGGAGTGGTGTCCCCAAAGGGAGATGTATACAGCTATGGTATTATGCTAATGGAAGTCTTCACAAGAAAGAAACCAACTGATGAAATGTTTTGTGAGGGACTAAGCTTAAGGTCATGGATCCAACAGTCATTGCCACGTGGGATAACTGAGGTTGTGGATCCAAATTTGATGGAGGGAGAGGAACAAGTTGTTTCTGCCATGGAAGTAGCCTTATCAAAAATCATGGACTTGGCTCTGGATTGCTCTCATGATTCTCCGAATGAGAGAATTAGTATGAAGGAGGTCTTTGTTCTGCTAAGCAAAATCAAAACCACATTTCAGCAGAGATGA 3609 0.3854 MEKASSFFLILILSSCRHFMASSDTIKSNNNNEDQSALLALKSHINLDPQHMLSNNWSTTFPLCNWFGITCDANTRRVTSLNLTNMNLNGTLPSQLGNLTYLLNLDLHNNSFNGIVPKELALLPRLEVLNLCTNNFGGELPPWISELSNLQSLSLCNNSFSGSIPTSLSNLSKLKSLNLTFNFISGSIPHELGRLHNLSVLDLSHNKLSADIPSSIFNISTLQVIDLAYNSLSGSIPQNVGNVSQLRSIDLSKNDLVGNVPLSFFNISNLGQIRFSYNNLTGSLPSDLCLAFPMLEFLDLSGNSFFGEIPSSLHQCWKLKFLNMDNNRIYGHLPSDIGSLSMLQTLSLNNNNLTGSLPQSLFNISSLRLINLRNNFFGGQLPEEMCDQAHSLQHISILNNNVGGTIPKSIGNCTSLINLYLGANFFTGTIPYEIGDKLRKLEILHLQGNKLTGSIPPNIFNISGLQSLSLSNNNLSGTLPIQAHHTLSNLQFLYISGTNLSGEIPTPLFNASMLLQLVLANSSFSGPIPDSFGNLRNLQVLYLLGNNFTGGLGFLNSLTQCRQLTKILLASNPLGGTLPNAIGNLSQSLQRFDVRSCNIKGEIPPQIGNLKNLYDLKMYNNQFVGEIPSTIGNLQLLQLLELSNNRLNSSIPEQICRIQNLNQLILSNNNIFGPIPRCVDHLSSLRILYLDSNNLNSTIPSTLWSLSYILEVNLSSNGLEGSLPAEISSMNAVINLDISHNKLSGKIPTGIGSLQRILNLSLAYNMLQGPIPDSIGNMLSLEFLDFSHNLLSGTIPKSFVNIVDLKFINLSYNRLHGEIPYGGKFINFKPQSFMMNDGLCGRPNFGVPPCSNDGAKNSRRSKALKLAIPLIVLCMILACAVILICRRKPRKGSAAEDLPSFQFPSRISYFELLEATQKFDESNLIGRGGLGSVFRGELSNGTVVAVKVFNLEIQQAPRSFDAECEAMRNLRHRNLVKVISSCSNSIDFKALVMEFVANGNLEKWLYSHNYCLPFMQRLKVVIDVACALEYLHHGNTRPVVHCDLKPSNVLLDEDMVAHVCDFNIAKLLEEDQSEIHTNTLATLGYMAPEYGLEGVVSPKGDVYSYGIMLMEVFTRKKPTDEMFCEGLSLRSWIQQSLPRGITEVVDPNLMEGEEQVVSAMEVALSKIMDLALDCSHDSPNERISMKEVFVLLSKIKTTFQQR 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00765 1202 SMART serkin_6 919 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00765 1202 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 198 360 - -
Aip04g00765 1202 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 238 - -
Aip04g00765 1202 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 294 435 - -
Aip04g00765 1202 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 437 1199 - -
Aip04g00765 1202 Gene3D Phosphorylase Kinase; domain 1 902 995 - -
Aip04g00765 1202 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Aip04g00765 1202 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Aip04g00765 1202 Gene3D Ribonuclease Inhibitor 290 387 IPR032675 -
Aip04g00765 1202 Pfam Protein kinase domain 920 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00765 1202 Gene3D Ribonuclease Inhibitor 388 556 IPR032675 -
Aip04g00765 1202 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Aip04g00765 1202 Pfam Leucine rich repeat 439 500 IPR001611 GO:0005515
Aip04g00765 1202 Pfam Leucine rich repeat 759 815 IPR001611 GO:0005515
Aip04g00765 1202 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Aip04g00765 1202 SMART LRR_sd22_2 634 663 - -
Aip04g00765 1202 SMART LRR_sd22_2 778 804 - -
Aip04g00765 1202 SMART LRR_sd22_2 147 173 - -
Aip04g00765 1202 SMART LRR_sd22_2 340 366 - -
Aip04g00765 1202 SMART LRR_sd22_2 195 221 - -
Aip04g00765 1202 SMART LRR_sd22_2 438 464 - -
Aip04g00765 1202 SUPERFAMILY L domain-like 57 333 - -
Aip04g00765 1202 SMART LRR_typ_2 147 171 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 292 316 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 340 364 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 195 219 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 99 122 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 438 462 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 634 658 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 778 801 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 487 511 IPR003591 -
Aip04g00765 1202 SMART LRR_typ_2 682 706 IPR003591 -
Aip04g00765 1202 CDD STKc_IRAK 925 1195 - -
Aip04g00765 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1039 1051 IPR008271 GO:0004672|GO:0006468
Aip04g00765 1202 ProSiteProfiles Protein kinase domain profile. 919 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00765 1202 Gene3D Ribonuclease Inhibitor 189 289 IPR032675 -
Aip04g00765 1202 Gene3D Ribonuclease Inhibitor 557 859 IPR032675 -
Aip04g00765 1202 Gene3D Transferase(Phosphotransferase) domain 1 996 1202 - -
Aip04g00765 1202 Pfam Leucine Rich Repeat 295 316 IPR001611 GO:0005515
Aip04g00765 1202 PANTHER - 6 238 - -
Aip04g00765 1202 PANTHER - 294 435 - -
Aip04g00765 1202 PANTHER - 437 1199 - -
Aip04g00765 1202 PANTHER - 198 360 - -
Aip04g00765 1202 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Aip04g00765 1202 SUPERFAMILY Protein kinase-like (PK-like) 898 1196 IPR011009 -
Aip04g00765 1202 SUPERFAMILY L domain-like 291 510 - -
Aip04g00765 1202 SUPERFAMILY RNI-like 485 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00765 Aip-Chr4 9608222 9614362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00765 1 1196 Receptor kinase-like Gene Family AT5G46330 33.849 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip04g00765 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00765 - K13420 lja:Lj6g3v0938090.1 1059.28