Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00735 ATGGAATCCGGTGGTGACGGCCGTGGTCGCGGCGGAAGAGGGCCACGCCGCCAACAACGACAGCCGGAGCTCAATCTTCAACCACAATGGCGCCGTCCCTTAACATCACCAACAACCTCACACTCAAACATCACTCTCCAACCCCAATGGCGACGATCGACGCAACCGCCGCCAACAGCCCTTCCTTCTCACCCTCAGTATTCTGCCGCCGCCGCTGAACAACCGCGTGAGCTCCTTCTCCAACCAGAGTGGCGCCGCCCGAGGCCCCCGACGACGACAACAACTTCTGCTCCGGAACCGGAACCGGAACGGAGGCTACCGAGGCCCACTTCTTCGTTCTGGAACCAGAATCAGTATTCTCCGAAGCCGCAGAGCTCGAGTTCCGGCAGTGAAGGTTCTAGAACTTCCAGCGCTGCTGACCATGCTGACTTTTGGCGACTTCCCTCAGATTCTCAAGTTCCCAAACTAGAAAGACTGCAAATATCCAGACAGTTAGCTACCCCATCTAGTACCCTCGAAAGGAAGGATAAGCTTTCACCTATTCGGAGACCCGACAATGGTGGCACATTGGCAATTCTAACTAGCAAACTCCGTGTTAATCATTTCCCTGTGAAGTTAAATCCAGAGAGTGTAATAATGCATTACAATGTTGGCGTTAAACCAAAGTTTCCCTCAAAGCATGGCCGGCCTCAGAAATTATCAAAATCTGATCTGTCCATGATTAGAGATAAATTGTTTTCTGATGATCCAGAGAGATTACCCCTGGATATGACTGCATATGATGGTGCAAAGAATATCTTTAGTGCAATACAATTACCGGAAGAAACCTTTACTGTGGAGCTTTCTGAAGGAGATGATGAAAAGACCCTTACATATAGTGTTACCTTAACACTTGTTAATACATACAGGCTTCGCAAGCTAATGGACTATCTTAATGGTCACAGCCTCTCAATTCCCAGGGATATTTTACAAGGGATGGATGTGGTGGTCAAGGAGAATCCATCTAGGCGCACTGTTGCAGTGGGACGACACTTCTATCCCCCTATGGCACTGAAAGATCTTCACCGCGGCATAATTGCTGTTGGTGGGTTTCAGCATAGTTTAAAGCCTACATCGCAGGGTCTGTCCCTATGCGTAGACTACTCTGTGTTGGCTTTCCGAAAGCAAGTGTCAGTCTTGGATTTCTTGCATGAGCATATACATAATTTTAAGTTGGAGGAATTTGAATACTTCAGAAAGGATGTTGAAGATGCACTTATTGGATTGAAAGTTAGTGTGACTCATCGTAAATCCAAACAGAAATATACTGTTGTGAAATTAACACCTCAGAATGCAAGGTACGTCACTTTCCCCATTGACAATGCTGAGGGGTGGAATCTCTCAAAGAATGCTAGTCTTCTTAGCTTTTTTAGAGACAAATATGGGAAAGACATTGTATACAAAGATATTCCCTGTTTAGACTTAGGGAAAGGCAACAAGAAGAACTATGTACCTATGGAATTCTGTGTTTTGGTTGGGGGGCAGAAATATCCTAAAGAACGTCTGGATGCAGATTCTGCAAAGACATTGAAAGCACTGTCACTAGCTCACCCAACTGAGAGGGAGAGTGCAATACAAAAGATGGTGCACTCAAATGATGGACCTTGCGGTGGTGGTGTGATAACAAATTTTGGAATGAAAGTGAACACGAACATGACAACCATTCTAGGACGTGTCATTGCCCCCCCAGAATTAAAGCTAGGTGATCCAAATGGCAAGGCTATCAAGATATCGTTGGATCTAGAGAAATGTAATTGGAACCTTCTTGGAAGATCAATGGCAGAAGGCAAACCAGTTGATTGTTGGGCCATTCTTGATTTTACTAGTTCTGGGTCATATAGGCACCAATTGAGAGTCAACGAATTCGTTAAAAAGCTTATTGGTAAATACGAAAGAATGGGTATAAACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGCAGATACTTGCAAGGAATGATTTGCTCTCTGAATTACTTCAAAAGATTAGCAATACTTGTAAACAGAATCATGGTCACATGCAATTTCTCCTGTGTGTGATGACTAAGAAAAGTCCAGGTTACAAGTACCTTAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACACAATGCTGCTTATCTCATAGTGCTAATGAAGGGGATGACCTATTTTATACTAATCTGGCCCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTCAACAATATGTTCCCTTACTTTGAGGAAGATAGGCATGTTATGTTTGTTGGGGCTGATGTCAATCATCCTGGTTCTCGGGACACCAAGAGTCCATCGATTGCTGCTGTGGTTGCAACTGTTAATTGGCCTGCAGCAAATCGTTACGCAGCACGTGTTTGCCCTCAGTACAATCGGAGCGAGAAAATACTCAACTTTGGGGAAGTTTGCTTTGAGCTTGTTGCATGTTATAGAAGGATGAATGGAGTCAGGCCTGAAAAAATCATCATTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGATATGGTTCTTAATGAAGAGCTACAGGATTTGAAGAGAGAATTCCAGAGATTAAATTACTTCCCAACTATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGATTCTTTCCAGAGGGTAGGAGGGATGGATCATCCACTGGCAATGTTTTGCCAGGAACAGTTGTTGATGCAAAAGTTACTCACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCATAGGCACCAGCAAGCCTACTCACTACCACGTTTTATGGGATGAACACAGGTTTAAATCTGATGAATTGCAAAAGCTTATATATGACATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCGTTAGTCCCTCCAGTGTACTATGCTGACCTCGCTGCTTATAGAGGACGATTATACCATGAAGCAAGGGTTGGGATGCAATCTATGAAATCAGTAGGATCCTCATCTTCTAAGGCTTCTTTTGAGCAGGGATTTTATAGGTTGCATCCTGACTTGGAAAACTTGATGTTCTTCATCTAA 3084 0.4384 MESGGDGRGRGGRGPRRQQRQPELNLQPQWRRPLTSPTTSHSNITLQPQWRRSTQPPPTALPSHPQYSAAAAEQPRELLLQPEWRRPRPPTTTTTSAPEPEPERRLPRPTSSFWNQNQYSPKPQSSSSGSEGSRTSSAADHADFWRLPSDSQVPKLERLQISRQLATPSSTLERKDKLSPIRRPDNGGTLAILTSKLRVNHFPVKLNPESVIMHYNVGVKPKFPSKHGRPQKLSKSDLSMIRDKLFSDDPERLPLDMTAYDGAKNIFSAIQLPEETFTVELSEGDDEKTLTYSVTLTLVNTYRLRKLMDYLNGHSLSIPRDILQGMDVVVKENPSRRTVAVGRHFYPPMALKDLHRGIIAVGGFQHSLKPTSQGLSLCVDYSVLAFRKQVSVLDFLHEHIHNFKLEEFEYFRKDVEDALIGLKVSVTHRKSKQKYTVVKLTPQNARYVTFPIDNAEGWNLSKNASLLSFFRDKYGKDIVYKDIPCLDLGKGNKKNYVPMEFCVLVGGQKYPKERLDADSAKTLKALSLAHPTERESAIQKMVHSNDGPCGGGVITNFGMKVNTNMTTILGRVIAPPELKLGDPNGKAIKISLDLEKCNWNLLGRSMAEGKPVDCWAILDFTSSGSYRHQLRVNEFVKKLIGKYERMGINMQEPIWYEESSMQILARNDLLSELLQKISNTCKQNHGHMQFLLCVMTKKSPGYKYLKWISETKVGIVTQCCLSHSANEGDDLFYTNLALKINAKLGGSNVELNNMFPYFEEDRHVMFVGADVNHPGSRDTKSPSIAAVVATVNWPAANRYAARVCPQYNRSEKILNFGEVCFELVACYRRMNGVRPEKIIIFRDGVSEYQFDMVLNEELQDLKREFQRLNYFPTITLIVAQKRHQTRFFPEGRRDGSSTGNVLPGTVVDAKVTHPFEFDFYLCSYYGSIGTSKPTHYHVLWDEHRFKSDELQKLIYDMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEARVGMQSMKSVGSSSSKASFEQGFYRLHPDLENLMFFI 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00735 1027 SUPERFAMILY Ribonuclease H-like 676 989 IPR012337 -
Aip04g00735 1027 Pfam Argonaute linker 1 domain 340 388 IPR014811 -
Aip04g00735 1027 ProSiteProfiles Piwi domain profile. 690 989 IPR003165 GO:0003676
Aip04g00735 1027 SMART Piwi_a_2 690 988 IPR003165 GO:0003676
Aip04g00735 1027 ProSiteProfiles PAZ domain profile. 390 506 IPR003100 GO:0005515
Aip04g00735 1027 SMART DUF1785_2 339 389 IPR014811 -
Aip04g00735 1027 CDD PAZ_argonaute_like 409 505 - -
Aip04g00735 1027 Pfam PAZ domain 404 519 IPR003100 GO:0005515
Aip04g00735 1027 Gene3D - 758 1027 IPR036397 GO:0003676
Aip04g00735 1027 Pfam Piwi domain 691 985 IPR003165 GO:0003676
Aip04g00735 1027 Gene3D - 572 753 - -
Aip04g00735 1027 SMART PAZ_2_a_3 390 528 IPR003100 GO:0005515
Aip04g00735 1027 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 79 1026 - -
Aip04g00735 1027 MobiDBLite consensus disorder prediction 155 174 - -
Aip04g00735 1027 MobiDBLite consensus disorder prediction 20 57 - -
Aip04g00735 1027 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 79 1026 - -
Aip04g00735 1027 Gene3D paz domain 384 510 - -
Aip04g00735 1027 MobiDBLite consensus disorder prediction 1 187 - -
Aip04g00735 1027 CDD Piwi_ago-like 553 987 IPR045246 -
Aip04g00735 1027 MobiDBLite consensus disorder prediction 1 17 - -
Aip04g00735 1027 MobiDBLite consensus disorder prediction 109 137 - -
Aip04g00735 1027 Pfam N-terminal domain of argonaute 196 330 IPR032474 -
Aip04g00735 1027 SUPERFAMILY PAZ domain 385 545 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00735 Aip-Chr4 9243375 9248077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00735 197 1002 Eukaryotic Initiation Factors Gene Family AT1G48410 35.253 7.39e-144 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00735 K11593 - gmx:100783571 1477.23