Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00723 ATGCTTGCAGTTTTAGATATGGAGATTGAGAGAAGTGGAGAAAACAAAATTCTTAGACTGAGATTCACTTCAAGTCACAAGCGTTCAAAGAGGGTGCTCAGTCATATAATTATAGTCGTCCTCCTGAACAAAATAATGGCATGTTTGGTAGATTTTGATCAAGGCACAACAGGTCATCATCACAAAAATGAGGATGCTTTGGGTTGTTGTTCAATTGATCTGTGCACATCCTCTATAAAGATGGATGCAGAGGATACAGATCTACGTCTTTGCTTCCGTATAATTTCTTCCTCAAAAACATATACACTACAGCCTCGTTATGATAGAGAAAATAGAAACTCAGCAACTGGTGCTTCATCAACTAGTCAATCAGAGGATGGTGACAAATATTTGATGGATGACATATATCCAAAGGAAGTCCATAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAGTGCAGTGGTGCTGATCCGGACTGGGCATCTTTAAACCTTGGCATATTACTCTGTATAGAATGCTCTGAAGTGCATCGAAATCTTGGAGTTCATATCTCGAAGACCAACAAATTGAATACGATCTACAAATTTTGGATCGGAACTGGATCAAATTTGTGA 633 0.3855 MLAVLDMEIERSGENKILRLRFTSSHKRSKRVLSHIIIVVLLNKIMACLVDFDQGTTGHHHKNEDALGCCSIDLCTSSIKMDAEDTDLRLCFRIISSSKTYTLQPRYDRENRNSATGASSTSQSEDGDKYLMDDIYPKEVHSVSKILRGIPGNDKCAECSGADPDWASLNLGILLCIECSEVHRNLGVHISKTNKLNTIYKFWIGTGSNL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00723 210 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 50 203 - -
Aip04g00723 210 SMART arf_gap_3 141 210 IPR001164 GO:0005096
Aip04g00723 210 PRINTS HIV Rev interacting protein signature 172 189 IPR001164 GO:0005096
Aip04g00723 210 PRINTS HIV Rev interacting protein signature 153 172 IPR001164 GO:0005096
Aip04g00723 210 PANTHER CENTAURIN/ARF 50 203 IPR045258 GO:0005096
Aip04g00723 210 ProSiteProfiles ARF GTPase-activating proteins domain profile. 141 203 IPR001164 GO:0005096
Aip04g00723 210 SUPERFAMILY ArfGap/RecO-like zinc finger 143 196 IPR037278 -
Aip04g00723 210 Pfam Putative GTPase activating protein for Arf 144 196 IPR001164 GO:0005096
Aip04g00723 210 Gene3D Arf GTPase activating protein 128 203 IPR038508 -
Aip04g00723 210 MobiDBLite consensus disorder prediction 106 126 - -
Aip04g00723 210 MobiDBLite consensus disorder prediction 106 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00723 Aip-Chr4 8968720 8973091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00723 151 192 C2H2 Transcription Factor Family AT3G07940 61.905 1.30e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00723 K12489 - aip:107638789 394.045