Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00717 ATGTCCATCAACAACAACAACGACCTTAACGAGAATACGGTTAGGGTGTGTTCTCCTTCTACCAACGATAAATCCTTCTCCCTCACCACGATAGATGATGGATCTCCAAACAGTGATCAGCTGCTTGAGGTTGCGGATGAGCAAAACATTCTTGTGAATGGCTGCGATCAGTTATTTGAGATTGATGGAAGTGAACATGAGAATGGGAGGGATGAAACAACAGTGGTTGATGGTTATGCTGGAGAATCTCAAGGGAAAGGCTACCCTCCGCCGGTTGTGGGTATGGAGTTTGATACTTATGATGATGCTTACAACTATTATAATAGCTATGCTAAGGAGATTGGATTTGCTATTCGGGTTAAGTCGTCATGGACCAGACGTAACAGCAAAGAGAAGCGCGGTGCTGTGTTGTGCTGCAACTGTGAGGGCTTTAAAACACTTAAGGAAGCAAATAGCCACAGGAAAGAAACAAGAACAGGTTGTCTGGCGATGATTAGGTTGCGATCAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAGCACAACCATTCATTTGATCCTGAGAGAGCACAAAACTCGAAATCACATAAGAGGACAGACGGTGGGTCGAAAAGAAAACTCGAGCCAACTCTAGATGTTGAAGTACGAACAATCAAGCTATATCGAATGCCTGTTGGGGATGCATCGGGTTATGGAAGTCCAAATTCTAATGAAGGAGGAACTAGCACCAACCTTAATTTTTCTAGGCATTTGAAACTTAGGAAAGGTGATACAGAACTTGTTTCAAACTACTTCTGCAAATGTCAACTCATAAATCCCAATTTCTTCTATGTTATGGACTTGAATGATGATGGACAACTGCGGAACATTTTTTGGATTGATTCTAGATCTAGAGCTGCATATAGTTATTTTGGTGATGTGGTTGCATTTGACTCGACATGTTTGTCAAACAATTATGAGATTCCACTTGTTTCATTTGTCGGTGTTAATCACCATGGGCAGTCTATTTTGCTTGGATGTGGTCTGCTTGCAGATGAGACATTTGAAACATATAATTGGTTTTTTAGGGCGTGGCTTACATGTATGTCCGGCCGTCCTCCTCAAACTGTTGTTACAAACCAGTGCAACAAGGCCATGCAAAGTGCAATAGCGGAGGTTTTCCCGAGAGCTCACCACAGAATTTGTCTATCACAAGTCATGCAGAGTATTCTCGGATGTTTGGTACAGTTTCAGGAATACGAGGCAATTCAGATGGCATTGTCTAGAGTGATATATGAAACTAAGACAATCGATGAGTTTGAAAGGGCTTGGGATGAACTTACCCAGCATTTTGGATTAAGAAATCATGAAAAGCTTCAATCCTTGTATGGTGAACGTGAGCACTGGGCTCCTGCTTACACCAAGGACACGTTTTTTGCTGGAATTTCTGATCAAGAAAAAGGTGAGTCCGTGGTACCTTTTTTTAAGGGTCATGTGCATCAGCAAACTTCCTTGAAAGAATTTTTTGAGATTTATGAACTAGTTATGGAGCAAAAGAGAAAAACTGAAGCTATTGATGATTTCAAGTCGCGAGATTCTAGTCCTTCACTGAGAACAAGGTACTACTATGAGTTGCAACTGTCCAAATTGTACACAAATGCAATGTTCAGGAAGGTCCAGGAGGAGATTGTGATGATGTCCTCTTGTTTTGGCATCACAGAAAGTCAAACAAATGGATCTTCAGTGACATACATGGTTAAGGTACGCCAAGGCGAGGAACTTGTCCAAGATGCAGGGCATGTGGAAGTCACATATGATAAAACCGGAGCAGAAGTGCGCTGCAGTTGTTGTTGCTTTAACTTCAAAGGCTATTTGTGCAGACATGCCTTGTCTATCCTCGATTATAATGGCGTGGAGGAAATTCCTTGTCAATATGTTTTGCCGAGATGGAGGAAGGATTTTAAACGATTGTATGTACCTCACCTTACCTCTTATAATGTTGATATCACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGGGCGATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGCTCATTATATGGTTTCTTGGCAGGCTTTTAAAGAGTCTTTGAATAAGATTCGCCTTGTATCAGATAAAATTGAGTAA 2148 0.4148 MSINNNNDLNENTVRVCSPSTNDKSFSLTTIDDGSPNSDQLLEVADEQNILVNGCDQLFEIDGSEHENGRDETTVVDGYAGESQGKGYPPPVVGMEFDTYDDAYNYYNSYAKEIGFAIRVKSSWTRRNSKEKRGAVLCCNCEGFKTLKEANSHRKETRTGCLAMIRLRSVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTDGGSKRKLEPTLDVEVRTIKLYRMPVGDASGYGSPNSNEGGTSTNLNFSRHLKLRKGDTELVSNYFCKCQLINPNFFYVMDLNDDGQLRNIFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVSFVGVNHHGQSILLGCGLLADETFETYNWFFRAWLTCMSGRPPQTVVTNQCNKAMQSAIAEVFPRAHHRICLSQVMQSILGCLVQFQEYEAIQMALSRVIYETKTIDEFERAWDELTQHFGLRNHEKLQSLYGEREHWAPAYTKDTFFAGISDQEKGESVVPFFKGHVHQQTSLKEFFEIYELVMEQKRKTEAIDDFKSRDSSPSLRTRYYYELQLSKLYTNAMFRKVQEEIVMMSSCFGITESQTNGSSVTYMVKVRQGEELVQDAGHVEVTYDKTGAEVRCSCCCFNFKGYLCRHALSILDYNGVEEIPCQYVLPRWRKDFKRLYVPHLTSYNVDITNPVQCFDHLYKRAMQVVEEGMISQAHYMVSWQAFKESLNKIRLVSDKIE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00717 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 712 IPR031052 GO:0006355
Aip04g00717 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 41 712 - -
Aip04g00717 715 Pfam FAR1 DNA-binding domain 105 189 IPR004330 -
Aip04g00717 715 MobiDBLite consensus disorder prediction 186 211 - -
Aip04g00717 715 ProSiteProfiles Zinc finger SWIM-type profile. 595 633 IPR007527 GO:0008270
Aip04g00717 715 Pfam SWIM zinc finger 607 630 IPR007527 GO:0008270
Aip04g00717 715 Pfam MULE transposase domain 310 404 IPR018289 -
Aip04g00717 715 SMART 26again6 608 635 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00717 Aip-Chr4 8852902 8855686 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g00717 MULE 1.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00717 K17604 - gmx:100796448 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00717 04 8852902 8855686 Aip04g00717 04 8852902 8855686 ECH