Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00714 ATGTCGTCTCACCAAACCACCACTGACTCCGAGCTCGTCTGCGTCACCGGTGCAAACGGCTTCATCGGTTCCTGGCTAGTCCACACCCTCCTCCACCACCACCCACGCTACACCGTCCACGCCACCGTCTTCCCCGGCTCCGATTACTCCCACCTCCTCACCCTCCACCCTGATGCCCATTCCCGCATCAAAATCTTCCCCGCCGACATCCTCGACGCCGCCTCCATATCCGCCGCAATCTCCGGCTGCTCCGGCGTCTTCCACGTCGCCTCCCCCTGCACTCTCGACGACCCCGCAGACCCGGAGAATTCCCTCCTCAGGCCTGCCGTCCAAGGAACCCTAAACGTCCTCGAGGCCGCGAAGCGAACAAATGCGCGGCGCGTTGTCCTCACGTCCTCAATATCCGCCATGGTTCCGAACCCTAATTGGCCTCCAAACAAACCTTTCGACGAGGATTCCTGGACGGACGTTGAATTCTGCAAGAAGAGGGGGAAGTGGTACCCAGTGTCGAAGACAGCGGCGGAGAAGGCGGCGTGGGAGTTCATGGAAAAGAACGGCGGCGCTGACGTGGTGGCAGTGCTTCCGTCGACGTGTCTTGGGGAACTGCTGCAGAAGGAGCTGAATGCAAGCTCGGCGGTCCTGCAGAGGCTGATGACGGGGTCGAGGGACACGCAGGAGCATTACTGGTTGGGTGCAGTGCACGTGAGGGACGTTGCTAGGGCTCAGGTTTTGATCTATGAGACTCCTTCTGCTGCTGCTAGATACTTGTGTACCAATGGTATCTACCAGTTCTCTAGCTTTGCAAAGATTCTCTCTGAGTTGTACCCTGATTTTCCTATCTACAGGTTCCCTGAAGAAACTCAACCTGGCTTGACACCATATAAAGATGCAGCAAAGAGACTAATAGATTTGGGTTTTGTGTTCACCCCAGTTGAAGATGCTGTGCGAGAAGCAGTGGAGAGCCTCATAGCTAAAGGTTTCTTGCAGGGAATACCCTCACAAAATTAG 1008 0.5625 MSSHQTTTDSELVCVTGANGFIGSWLVHTLLHHHPRYTVHATVFPGSDYSHLLTLHPDAHSRIKIFPADILDAASISAAISGCSGVFHVASPCTLDDPADPENSLLRPAVQGTLNVLEAAKRTNARRVVLTSSISAMVPNPNWPPNKPFDEDSWTDVEFCKKRGKWYPVSKTAAEKAAWEFMEKNGGADVVAVLPSTCLGELLQKELNASSAVLQRLMTGSRDTQEHYWLGAVHVRDVARAQVLIYETPSAAARYLCTNGIYQFSSFAKILSELYPDFPIYRFPEETQPGLTPYKDAAKRLIDLGFVFTPVEDAVREAVESLIAKGFLQGIPSQN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00714 335 CDD FR_SDR_e 13 306 - -
Aip04g00714 335 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
Aip04g00714 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 327 - -
Aip04g00714 335 PANTHER OS06G0623300 PROTEIN 12 327 - -
Aip04g00714 335 Gene3D - 2 335 - -
Aip04g00714 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00714 Aip-Chr4 8810468 8812734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00714 11 328 Monolignol Biosynthesis Gene Families AT2G02400 65.204 1.28e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00714 - - vra:106775739 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00714 04 8810468 8812734 Aip04g00714 04 8810468 8812734 ECH