Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00708 ATGGATAACAAATTGAAGTTATCATTATTGGTGCTTTTGCTCAATTGTTTCTTGTTTGTGGCACTTTCACAAACAGCTTCCAATGATGATGTTGAGGCCTTAAATTCTCTAAGGGATTCTTTGCAAATCAATATTCCCAGTTGGGTTGTTGGTTCAGATCCTTGTAGTGGTGCTTGGGAAGGAATCACATGCAAGAACTCACGTGTTGTTTCCATATCATTACCAAACACGGGCTTAAAAGGCCAACTTTCTCAAAATATTGGATCATTCTCTGAATTAGATACTCTGGATCTGTCTTACAATAAGGACTTAACAGGACCACTTCCAGCAGAAATTGGAAACTTGAAGAAGCTAACAAAATTAATTCTTGTGGGTTGTGGTTTTAATGGTCAAATTCCTGATCAAATCGGATCTCTTCCTCAGCTGGTTTTCTTGTCCTTAAACTCCAACAATTTTAGTGGAACAATTCCGTCTTCAATTGGGAATCTAGCAAACCTAAATTGGCTTGATTTAACAGAAAATGAAATTGGAGGAGAAATCCCAGTATCCCCTGGTCTTGATACCCTCCTCAAAGCACAGCACTTCCATCTTGGGAAGAATAAGTTTTCAGGAGAAGTTCCTTCTCAACTTTTTAGCTCAGGAATGGCTCTCATGCATTTGATTCTTGACAACAATCAGCTAACCGGCGAGATTCCGGATACAATTGGACTTGTTCAGAATCTAACTTTGATACGCTTTGAACACAATACATTAAGAGGATTGGTGCCTCAGAGCCTCAACAACCTTACCAATGTTGCAGACCTGATATTGTGCAACAATAAGCTGGAAGGTCCCCTGCCAAATCTTACTGGAATGAGCTCCCTGAAATACTTGGATTTGAGCAGCAATGCCTTTGATAGCACAGATTTTCCACAATGGCTTTTGATTATGAAGAATTTAACAACATTACGGATGCAGGAGGCAAACCTGTCTGGCCAAATACCTGCTGGTTTCTTTAGCCTTCCCTCTTTGCAATATGTGGTATTAAGTGTGAATCAACTTAATGGAACACTGGATCTTGGCCCCTACTATAGCAAAAAGTTGCAAGTTATTGATTTGCACTCGAACTTAATTGAGGAGTTTACGCAGCAAAATCAACTGCCTAAGTTCATCATAGTGCTTCAAAGTAATCCAATTTGTTATGAAACTGGAACTACCGAAACTTTCTGCAAACCTTTACAAATCTCAGATGGAAATCCACAAAACAAATGTCCAGCTTCTGGTTGCAGCTCTGATAAGAGTCTCAGTCCCATGTGCCACTGTGCCTATCCATACACTGGTACTGTAACTTACAGAGCACCTTCCCTTTATGACTGGAGCAACACCACTTCAATAGAGACAGATATCAAGCAGGCTCTTCAATCCGGTGGTCTACCTGTGGAATCAGTAGTTTCAAGCACTCTAGATTCCCATCCATTTGAGTGTTTTGATTTTATTATCAAAATCTTCCCATTAAACAAGGATAGTTTCAGCCAGAGTGAAATTTCTCAGATGAGTCTTGTGCTTCTTAACCTCAGTGCTCATAGACCATATGATTTTTACCCTGACAAAATCGAGCCTAAGCAGTTGAGTAACTCATCAAACACTGCATTGTTGATTGGAGTGGCAGTTGGTGGTTCTTTTGTCCTTGTGCTATTACTACTTGCAGGGGTTTATGCTTTCCGCCAGAAGCTAAGAGCAGAAAGAGCGATTTCTCGAAACAATCCTTTTGGAAACTGGGATCCAAGTAAAAGCAACTGTGGCACCCCTGAGTTAAAGGCAGTAAGGCAGTTCTCTGTTAAAGAACTTAAGAAATACACAAACAACTTTTCACCAGCTAATGATGTTGGATCTGGGGGTTATGGAAAGGTTTATAAGGGAACTCTTCCCTCTGGACAACTGATAGCCATAAAACGAGCTCAAAAGGAATCGAAGCAGGGCGGGTTAGAATTCAAAGCCGAGATTGAACTCCTTTCAAGGGTTCACCACAAGAATGTGGTAAGCCTAGTTGGATTCTGCTTTGAAGAAGGGGAACAGATGCTGGTTTATGAGTTTGTTCCAAATGGAACCTTGAAGGATACTATCACAGGTTCTTTTACACATCAAGCTTGA 2130 0.4056 MDNKLKLSLLVLLLNCFLFVALSQTASNDDVEALNSLRDSLQINIPSWVVGSDPCSGAWEGITCKNSRVVSISLPNTGLKGQLSQNIGSFSELDTLDLSYNKDLTGPLPAEIGNLKKLTKLILVGCGFNGQIPDQIGSLPQLVFLSLNSNNFSGTIPSSIGNLANLNWLDLTENEIGGEIPVSPGLDTLLKAQHFHLGKNKFSGEVPSQLFSSGMALMHLILDNNQLTGEIPDTIGLVQNLTLIRFEHNTLRGLVPQSLNNLTNVADLILCNNKLEGPLPNLTGMSSLKYLDLSSNAFDSTDFPQWLLIMKNLTTLRMQEANLSGQIPAGFFSLPSLQYVVLSVNQLNGTLDLGPYYSKKLQVIDLHSNLIEEFTQQNQLPKFIIVLQSNPICYETGTTETFCKPLQISDGNPQNKCPASGCSSDKSLSPMCHCAYPYTGTVTYRAPSLYDWSNTTSIETDIKQALQSGGLPVESVVSSTLDSHPFECFDFIIKIFPLNKDSFSQSEISQMSLVLLNLSAHRPYDFYPDKIEPKQLSNSSNTALLIGVAVGGSFVLVLLLLAGVYAFRQKLRAERAISRNNPFGNWDPSKSNCGTPELKAVRQFSVKELKKYTNNFSPANDVGSGGYGKVYKGTLPSGQLIAIKRAQKESKQGGLEFKAEIELLSRVHHKNVVSLVGFCFEEGEQMLVYEFVPNGTLKDTITGSFTHQA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00708 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 704 - -
Aip04g00708 709 Pfam Protein tyrosine and serine/threonine kinase 620 701 IPR001245 GO:0004672|GO:0006468
Aip04g00708 709 SUPERFAMILY L domain-like 35 387 - -
Aip04g00708 709 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Aip04g00708 709 ProSiteProfiles Protein kinase domain profile. 616 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00708 709 Gene3D Phosphorylase Kinase; domain 1 588 691 - -
Aip04g00708 709 Gene3D Ribonuclease Inhibitor 281 425 IPR032675 -
Aip04g00708 709 SUPERFAMILY Protein kinase-like (PK-like) 594 705 IPR011009 -
Aip04g00708 709 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Aip04g00708 709 Gene3D Ribonuclease Inhibitor 186 280 IPR032675 -
Aip04g00708 709 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 704 - -
Aip04g00708 709 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00708 Aip-Chr4 8777890 8784604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00708 10 703 Receptor kinase-like Gene Family AT5G49760 47.826 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip04g00708 PK_Tyr_Ser-Thr 5.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00708 - - aip:107638778 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00708 04 8777890 8784604 Aip04g00708 04 8777890 8784604 ECH