Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00707 ATGCATACTCCATCTCCCTCCCTCAACACCATCACTTGTAGCAACAACAACCTCAACATCAATAGCAACAAACTTCTATCACTCGCAGCAACAGCAACAACCACCTCAACGGCAAGAGCACAATTAAAAACCACCACCACTACCATCAGAGTCACAACAAGGTCTGTAGATCCTAGCAACGAAGATTGGAAAACCATCGGCGAAAGCGGCAACATTGGCCTAAGGCTGAGCAGCAGCGATGTCTTGCGACGTATGCAACGGGGAGGAAAAGGAGGAAAAAGAGAGGAGAAACAAATTAAGGCAAGAGAAGATTTAAAAAAATTGGCAAGTCAACTGAGGCAAGTGGAGAATTTTGGAGGTTGTGGGGGGCAGATAGTTAGGTTGGTGGAGAAATGTTCAAAACCCCGAGAAAGTCACATTTCAAGTTCTTTGTTAGTTGTCACAGCAAGAACAGCGAATCGAGATTACCAAACTCTGCTGGCTCTAAAGAATGAGTGGCAGAACACACCACCGGATTGGGAACGCTCGAATGATCCTTGTGGCGATGGTTGGATTGGCATTGGGTGCATCAACGGAGCCGTTACCTCCATAACACTGTCAAGCATGCATTTGACCGGCCAGCTTTCATCAGAAATAGGAGGACTATCTGAATTGCGGATTCTGTACGTAATATATCCAAATCCAATTATGCTTGATCAAACAACTCTAACAACGCACTTTCTTAATTTGTCTTCTAGAATTCTTTCTGGCTGTGGTTTCAGTGGTACTATACCGTATACAATTGGAAATATGCAACGGCTTGCATTCTTGTCTTTAAATTCAAATAACTTCAACGGGCAAATTCCATCCGCTATTGGTAATCTCACAAATCTATATTGGCTGGACTTGGCTGAAAACCAGCTTGAAGGGCCTATCCCAATATCAAATGAAACTTCTCTTGGTCTGGATATGCTACACCATACAAAGCACTTTCATTTTGGGGTTAACAAACTTTCAGGCAATATTCCTCCTCAGCTTTTTAGTTCAGACATGTCTCTGATACATGTGCTTTTTGAAAGTAACAAACTTACTGGCAATATTCCATCTACACTTGGACTAGTCCAGAATCTTGAGGTGGTGCGCCTTGATCGTAATTATCTAAGTGGACCTGTGCCTCCAAACGTTAGCAACCTTACAAATGTTAGGGATTTGCTGCTCTCCAACAATCGCCTATCTGGTCCTCTTCCCAACCTTACTGGAATGAACATCCTCAACTTCCTGGATGTGAGCAATAATAGTTTTGATCCATCAGAGTTTCCACTATGGTTAACAAATCTACCATCTTTGACAACAGTAAACATGGAGAATATAAACCTTCAAGGGAATATTCCTGTTTCATTTTTCAGTTTGAACCAGTTACAGACAGTGAATTTGAAAGACAACCAGCTAAATGGAACATTAGATATTGGTACTACCATCAGCAACCAACTGGAAATCATTGATTTGCAGACCAATTTTATTGATAAGTTTAATCCAGAAATTAATGTATCCAATGTGGAAATAATACTCGTCAATAATCCGGTTTGTGGAGGAGGATCTTCACAGGATTATTGTTCCATTCCACAACAAAACAACATGTATACAACACCACAGAACAATTGTGTGCCTGTCACCTGCAGCACAGATCAGAAAGAAAGCCCTAACTGCAAATGTGCATATCCATATACTGGAACTTTAACTTTCAGGGCACCAACCTTCTCTGACTTGCAAAACAAGTCAGTCTTTGCATCTTTGGAGTCGTCTATGATGCGGTCTTTTCATCGATATAATCTACCTGTGGACACAGTTTCTGTGAGCAATCCAAGAAAGGAAGCATTATACCTTGATTTGAGTCTAGAAGTGTTTCCATCCGGCATAGATCGTTTCAACCGAACGGGAATTATCAATATAGGCTTTGTGCTTAGCAACCAGACATATAAGCCTCCTCCCACTTTTGGACCATTTTATTTTATTGCTGATGATTATGAAAACTATATGAATGACTCAGTATTCATCAACTCTGAAGGATCCAATAAATCTTCAAAAACTGGCATAATAGCTGGAGTTGCTGGTGGTATTGTCCTGGTGATATTATTAATCATTGCAAGTGTTTATGCCTTGCACCAAAAGAATAAGGCGAAAAGAGCAACAGAGAAAAACAATCCTTTTGCAAAATGGGATGCAGATGAGAGCAATAGTAGTATCCCACAGCTGAAAGGAGCAAGGCGCTTCACTTTTGAAGAAATTCAGAGCTACACCAAAAACTTCTCACAAGCCAATAGTATTGGATCTGGAGGATACGGGAAGGTTTACCGAGGAACTCTTCCAAACGGGCACCTTATTGCTGTTAAAAGAGCTCAGAAAGAATCAATGCAGGGAGGGCTGGAGTTCAAGACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTATAGGTTTCTGCTTTGAGCAAGGAGAGCAAATGCTCATTTATGAATATGTTCCCAATGGCACTTTGAAGGATACGCTTTCAGGTAAAACAGGAATAAGATTGGACTGGATTAGAAGGCTGAAAATAACACTTGGTGCTGCCAGGGGGATGGATTATCTCCATGAACATGCCAATCCTCCCATCATACATAGGGACATCAAATCCACAAACATATTATTGGATGAACGTTTGAATGCTAAAGTTTCTGATTTTGGACTCTCCAAACCATTGGGAGATGGTGAAAAAGGTTACGTTACCACTCAAGTCAAAGGAACAATGGGCTACTTGGACCCGGAGTACTATATGACTCAGCAATTGACAGAAAAGAGTGATGTGTATAGCTTCGGAGTACTAATGTTAGAGCTGATAACAGCAAGAAGGCCGATAGAACGAGGAAGATACATTGTGAAAGTGGTTAAGAATGCCCTAGACAAGGACAAAGAGTTCTATGGCCTTAAGGAAGTCCTTGATCCATCCATTGATTTGGGAACAACACCACAGGGTTTTGACAAGTTTGTTGATCTTGCAATGCAATGTGTTGATGAGTCAAGTTCTAGCAGACCCTCAATGAACTTTGTGGTGAAAGAGATTGAGAACATGTTGCAGTTGGCTGGTTCCAACCCCAATGCAGAGTCTGCAACCACTTCATCTAGTCATGAAGTAAGCAAAGGGAGTTCTCAACATCCTTACAATAATGAGTTCTTTGATTCAAGTGTTGTGATTCCACGTCCTTAA 3237 0.4118 MHTPSPSLNTITCSNNNLNINSNKLLSLAATATTTSTARAQLKTTTTTIRVTTRSVDPSNEDWKTIGESGNIGLRLSSSDVLRRMQRGGKGGKREEKQIKAREDLKKLASQLRQVENFGGCGGQIVRLVEKCSKPRESHISSSLLVVTARTANRDYQTLLALKNEWQNTPPDWERSNDPCGDGWIGIGCINGAVTSITLSSMHLTGQLSSEIGGLSELRILYVIYPNPIMLDQTTLTTHFLNLSSRILSGCGFSGTIPYTIGNMQRLAFLSLNSNNFNGQIPSAIGNLTNLYWLDLAENQLEGPIPISNETSLGLDMLHHTKHFHFGVNKLSGNIPPQLFSSDMSLIHVLFESNKLTGNIPSTLGLVQNLEVVRLDRNYLSGPVPPNVSNLTNVRDLLLSNNRLSGPLPNLTGMNILNFLDVSNNSFDPSEFPLWLTNLPSLTTVNMENINLQGNIPVSFFSLNQLQTVNLKDNQLNGTLDIGTTISNQLEIIDLQTNFIDKFNPEINVSNVEIILVNNPVCGGGSSQDYCSIPQQNNMYTTPQNNCVPVTCSTDQKESPNCKCAYPYTGTLTFRAPTFSDLQNKSVFASLESSMMRSFHRYNLPVDTVSVSNPRKEALYLDLSLEVFPSGIDRFNRTGIINIGFVLSNQTYKPPPTFGPFYFIADDYENYMNDSVFINSEGSNKSSKTGIIAGVAGGIVLVILLIIASVYALHQKNKAKRATEKNNPFAKWDADESNSSIPQLKGARRFTFEEIQSYTKNFSQANSIGSGGYGKVYRGTLPNGHLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQMLIYEYVPNGTLKDTLSGKTGIRLDWIRRLKITLGAARGMDYLHEHANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGEKGYVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGRYIVKVVKNALDKDKEFYGLKEVLDPSIDLGTTPQGFDKFVDLAMQCVDESSSSRPSMNFVVKEIENMLQLAGSNPNAESATTSSSHEVSKGSSQHPYNNEFFDSSVVIPRP 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00707 1078 Pfam Leucine rich repeat N-terminal domain 152 189 IPR013210 -
Aip04g00707 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 144 1069 - -
Aip04g00707 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Aip04g00707 1078 SUPERFAMILY L domain-like 188 549 - -
Aip04g00707 1078 ProSitePatterns Protein kinases ATP-binding region signature. 768 790 IPR017441 GO:0005524
Aip04g00707 1078 Gene3D Phosphorylase Kinase; domain 1 732 837 - -
Aip04g00707 1078 CDD STKc_IRAK 768 1034 - -
Aip04g00707 1078 ProSiteProfiles Protein kinase domain profile. 762 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00707 1078 Gene3D Ribonuclease Inhibitor 315 524 IPR032675 -
Aip04g00707 1078 SUPERFAMILY Protein kinase-like (PK-like) 748 1047 IPR011009 -
Aip04g00707 1078 SMART serkin_6 762 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00707 1078 Gene3D Transferase(Phosphotransferase) domain 1 838 1056 - -
Aip04g00707 1078 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 144 1069 - -
Aip04g00707 1078 Gene3D Ribonuclease Inhibitor 154 233 IPR032675 -
Aip04g00707 1078 Gene3D Ribonuclease Inhibitor 234 314 IPR032675 -
Aip04g00707 1078 MobiDBLite consensus disorder prediction 1040 1078 - -
Aip04g00707 1078 MobiDBLite consensus disorder prediction 1040 1068 - -
Aip04g00707 1078 Pfam Protein tyrosine and serine/threonine kinase 765 1030 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00707 Aip-Chr4 8740809 8751361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00707 147 1076 Receptor kinase-like Gene Family AT5G49760 56.077 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip04g00707 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00707 - - aip:107638780 1878.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02433 01 123953323 123958607 Aip04g00707 04 8740809 8751361 PCT