Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00686 ATGTATCCGAGGCTGATACACCCACATGAAGCAGGGCTTGTTGGACAAGAAGATGTTCAAGTTGGTGGCGCCTCCAATCTCACACACAAGGGAGACCCATGTCTTGTTCTCACTGCTGATCCAAAACCAAGACTTCGTTGGACTCAGGACCTCCATGAACGCTTTGTTGATGCTGTCACTCAGCTCGGAGGTGCTAGTAAAGCTACGCCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATATAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGATTGTCGGGTTCATACTTAGAAAGTCCTGGTACTGACAACTCTTCTCCAAAGTTGCCAACTTCCGATACCAATGAGGGTTTTGAAATCAAGGAAGCCTTAAGAGCACAAATGGAAGTGCAAAGTAAACTACATTTGCAAGTAGAGGCAGAGAAGCATTTGCAAATTCGCCAAGACGCAGAGCAAAGATACATGGTCATGCTTGAAAGAGCTTGTAAGATGCTAGCTGATCAATTCATTGGCGCTACCGTCATAGACACCGACAACCAAAAGTTTCAAGGAGTCGGGAGCAAGACCCCAAGAGGTCCCATGGTTGATCCTCTTGGTTTTTTCTCCATGCCATCTACTGAAGTGGCGGGAGTCAATGTCCCGGAAGAGGAACTACCTCATAGCCTCCCACCACAGAGGGCTGACTGTTCGACTGAAAGTTGTCTAACCTCACATGAGACTACCGGGGGATTGATTTTAGAAGGATCACCCGGTGAGGGGAAAAGGAGGCTGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGACTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCCCAAGGTAACCCTCATGGAATAACTAGGTACGCCGGCATGTAG 948 0.4715 MYPRLIHPHEAGLVGQEDVQVGGASNLTHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGLSGSYLESPGTDNSSPKLPTSDTNEGFEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEQRYMVMLERACKMLADQFIGATVIDTDNQKFQGVGSKTPRGPMVDPLGFFSMPSTEVAGVNVPEEELPHSLPPQRADCSTESCLTSHETTGGLILEGSPGEGKRRLLGMDSMAAPLIWTEAKMRTQAINVAQGNPHGITRYAGM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00686 315 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Aip04g00686 315 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Aip04g00686 315 MobiDBLite consensus disorder prediction 99 133 - -
Aip04g00686 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Aip04g00686 315 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 313 - -
Aip04g00686 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 313 IPR044848 GO:0003700
Aip04g00686 315 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
Aip04g00686 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Aip04g00686 315 Gene3D - 41 99 - -
Aip04g00686 315 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00686 Aip-Chr4 8532959 8536268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00686 31 257 G2-like Transcription Factor Family AT3G24120 46.639 2.37e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip04g00686 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00686 - - gmx:100786397 550.821