Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00675 ATGACTTCTAGTTTACAGGATTTTTTAAAAAACTCAGGTGACACAGCCAATAAAATTGGGACCTATAGCGTTGTCTTGTGTGCCAAGTTTCAGAATGTACCTCTTTATGTGGCTGCACCGCTGACTTTAATTGATCTGTTACTTTCTTCCGGAGAAGAAATCGTCATCGAGGAGAGATCTTTGAAGGAGTTGTTGAACACGCTTGGAGAGCAAGTTGCTGCCTCATGA 228 0.4167 MTSSLQDFLKNSGDTANKIGTYSVVLCAKFQNVPLYVAAPLTLIDLLLSSGEEIVIEERSLKELLNTLGEQVAAS 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00675 75 Pfam Initiation factor 2 subunit family 11 72 IPR000649 GO:0044237
Aip04g00675 75 Gene3D - 7 75 IPR042529 -
Aip04g00675 75 SUPERFAMILY NagB/RpiA/CoA transferase-like 11 69 IPR037171 -
Aip04g00675 75 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00675 Aip-Chr4 8422891 8423379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00675 7 74 Eukaryotic Initiation Factors Gene Family AT2G05830 66.197 1.07e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00675 K08963 - gmx:100799311 100.908