Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00647 ATGGAGAACGGCGGTTTGGCACTGGCAACTTCAAAACAGCGAAGACGAGAAGACTGGTTGCTCATACGGCGATGGGATGATGACGGGATTGTGCCGGCGAGGAGAGGCACAGAACAAAGAGCCTTTGGGAACGGAAGGAAGGATAGGTCAGAGATAGAAGATGTGATAGCCTCGGTCGCATTTGTTGCAGAGGAGAAGCTTCGCTGGGAACTCACCGAAGGAGCAGCACTTGCTGATGATGTTGTCGTCAAAGGTGGGCTTGGGAGTGTGGGTCCTTCTTCACCCTGCATTCCCCTGGCCATGTCTTCGATCATACCCGACATGTTCAGGAGCTCATCCTCATCAATGTACCCCGCCACCATCATCCCTCCTTGTTCTCCAGTTCTCAAAGTGAAACAAGATCTTTCAATAATAACGTTGTTACCACCACAACCTTCCAGAGGCTGCCGTTCCCACCGCAACCACCGCAGCCCCACAGCCCCGCGGAACCCACAGACACTGGATCTTCTCTTCTCTGCTCGAGCGTGCTTACTCTCTGTTCGCCGGTGTCGCGCCGTGGAAGCTCCGTCGCCGTCGCAGGAGCTGTGTCGCCGTCGTAGGAAGCTCCGTCACCGTCCTAGGAAGCTGTGTCGCCGTTGTAGGAAGCTCCCTCGCCGTCGCGTAGAAGCTCTGTGGCCGTCGCCGTCTCCCCTGTTCAAGCGCGCTCTCTCTCTCTCTGTGTTCGCCGGTGTGGCCGTCTCCTTTGTCGTCGCCGTCACTCCCCTTCCTCCTCGCCGCCGGGAAGCAGTGAATCTGAAGAAAGCATCAAAGCTATTTTCGCTGAAGCAGGGACAGCATGGATCATCTGATGGCGTTCTTTTAATTGGAGCTACAAATAGGCTATATTCTCTTGATCTGACCTTGAGAGCATTGTTTCAGCAAGAGTTTGTTCTTGTCATTCTTGATGAAGCTTTAAGACGAGGTATCCTTAAGTTGTTGACTTGCAAACTAAGAGTTCATTCGATCTTTCACGAAATAGCAAGGTTTACGTTAGGTTATGTTACCACCGGTTTGGAAGGTTTGGTTAAGAAGGCTGGGTCAAGACAATCCGGCCTATTTGGTAGCAGCCTCTTAATTCTTACCCTAATTGCATTTTGTCATCTGAAAATTgatgaattgggtgtggcacttccaatggaggaaagaactatcccaatgggagaccgatacattggaccagttgctgttttgcaggaagagaccttaggtgaggagtttctgagctatggattcacaaaggaaatttggaaagggagcaacgcaagtgttgGCATATGGGTTGCAAATCTGACGGAAATTTTACTTTTTGGGCCCCCTGGTTGTGGAAAAACTCTTGTTGCCAAAGCTGTTTCCAATGAGGCAGGAGCTAATTCCATTCATATTAAGGGGCCGGAGCTCATAAATTTGTTGGAAAAAGTGAGAGAGAAGTTCGACTACTGTTTAGTTCGTGCAAGGGCATGTTCACCCTGTATATTATTTTTTGATGAGGTGGATGCTTTGTCAACCAAACGCGGTGCAGAAGGTGGATCAGGCATTGAACGAGTAGTGAATCAGTTACTAATCAAGCTAAACGGACGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTCTCTTCCGTCATGGTAGACTTGGTAAACAACTTTACGTTCCTCTGCCAAGCACTGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGGAGCCTGTTGATCTTACCGTGGATCTGAGAGCCATAGCTGAACCGTGTGAAAATTTTAGTGGCGCAGACCTTGCTGAATTGGTGGCTCAAGCAACTGTTGCTGCTATTGATGATATTGAAGAAGCTTTGACCTCAGTTGAAGCCTCTAGTGATACTTGCAAGCCAAGACATTTTGATACAAAACTTGGTAAGGTCTTTCCCTCAGTGTCTCCCGCGAAAAGGCGTAGGTATGAGCGCGTGGCAAAGCATCATGAGGATCATGGCACTGGTTGTGACTTAAACTTGAGCACTTCAAGTAGTAGCGAAAATGTGTATTAA 2064 0.4491 MENGGLALATSKQRRREDWLLIRRWDDDGIVPARRGTEQRAFGNGRKDRSEIEDVIASVAFVAEEKLRWELTEGAALADDVVVKGGLGSVGPSSPCIPLAMSSIIPDMFRSSSSSMYPATIIPPCSPVLKVKQDLSIITLLPPQPSRGCRSHRNHRSPTAPRNPQTLDLLFSARACLLSVRRCRAVEAPSPSQELCRRRRKLRHRPRKLCRRCRKLPRRRVEALWPSPSPLFKRALSLSVFAGVAVSFVVAVTPLPPRRREAVNLKKASKLFSLKQGQHGSSDGVLLIGATNRLYSLDLTLRALFQQEFVLVILDEALRRGILKLLTCKLRVHSIFHEIARFTLGYVTTGLEGLVKKAGSRQSGLFGSSLLILTLIAFCHLKIDELGVALPMEERTIPMGDRYIGPVAVLQEETLGEEFLSYGFTKEIWKGSNASVGIWVANLTEILLFGPPGCGKTLVAKAVSNEAGANSIHIKGPELINLLEKVREKFDYCLVRARACSPCILFFDEVDALSTKRGAEGGSGIERVVNQLLIKLNGRQNVFVIGATNRPLFRHGRLGKQLYVPLPSTDQRFSILKALARKEPVDLTVDLRAIAEPCENFSGADLAELVAQATVAAIDDIEEALTSVEASSDTCKPRHFDTKLGKVFPSVSPAKRRRYERVAKHHEDHGTGCDLNLSTSSSSENVY 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00647 687 SMART AAA_5 442 568 IPR003593 -
Aip04g00647 687 MobiDBLite consensus disorder prediction 145 164 - -
Aip04g00647 687 MobiDBLite consensus disorder prediction 662 687 - -
Aip04g00647 687 Gene3D - 444 660 IPR027417 -
Aip04g00647 687 CDD AAA 446 566 - -
Aip04g00647 687 MobiDBLite consensus disorder prediction 673 687 - -
Aip04g00647 687 Gene3D - 276 314 IPR027417 -
Aip04g00647 687 Pfam AAA+ lid domain 589 626 IPR041569 -
Aip04g00647 687 Gene3D - 567 645 - -
Aip04g00647 687 Pfam ATPase family associated with various cellular activities (AAA) 446 551 IPR003959 GO:0005524|GO:0016887
Aip04g00647 687 PANTHER AAA-FAMILY ATPASE 261 361 - -
Aip04g00647 687 PANTHER AAA-FAMILY ATPASE 444 664 - -
Aip04g00647 687 Gene3D - 315 359 - -
Aip04g00647 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 628 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00647 Aip-Chr4 7901473 7915707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00647 446 650 Calmodulin-binding Proteins AT3G56690 40.553 7.43e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00647 K14571 - pvy:116109825 273.863