Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00641 ATGCAAGTTCCAAGTCCTTCCTGGATGCAAACTACTTCAGGGTATGAAGATGTGGACAGTGAACTTGGTATTCCAACAATGATTACTTGGATTTATGATGGCAAAGAGGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCTTTGCAGAGATCGGGGAAGGACTTCACAATTATGAAGGTACTGCCTTCCGGTGTTTATCAATTCAGATTTATTGTGGATGGACAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCTGGGATTACTTACAATATTTTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTAAATCACCAGACTCTAGTTATAACAACTTACAACTTACTTCCGAAGATTACGCGAAGGAACCGCCATTGGTTCCTCCATTCTTGCAAATGACACTTCTTAATGTTCCTTCAACAAATATGGAAATCCAACCTCCTATATCAAGACCTCAGCATGTAGTGCTCAATCATCTGTACATGCAGAAAGGAAAGGGCAGCCCTTCAGTAGTTGCGCTTGGTACAACTCATCGGTTTCTCGCCAAATATGTCACTGTAGTGCTGTACAAGTCTTTGCAGAGGTAG 636 0.423 MQVPSPSWMQTTSGYEDVDSELGIPTMITWIYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDAGITYNILDLQDYVPEDIGSISGFEPPKSPDSSYNNLQLTSEDYAKEPPLVPPFLQMTLLNVPSTNMEIQPPISRPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00641 211 Pfam Glycogen recognition site of AMP-activated protein kinase 24 103 IPR032640 -
Aip04g00641 211 Gene3D Immunoglobulins 18 106 IPR013783 -
Aip04g00641 211 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 211 - -
Aip04g00641 211 SMART AMPKBI_2 119 209 IPR006828 GO:0005515
Aip04g00641 211 SUPERFAMILY AMPKBI-like 106 208 IPR037256 -
Aip04g00641 211 CDD E_set_AMPKbeta_like_N 25 101 - -
Aip04g00641 211 SUPERFAMILY E set domains 24 109 IPR014756 -
Aip04g00641 211 Gene3D - 114 209 - -
Aip04g00641 211 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 211 IPR043554 -
Aip04g00641 211 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 137 207 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00641 Aip-Chr4 7783227 7785475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00641 23 104 Protein tyrosine phosphatase (PTP) family AT3G01510 31.818 3.91e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00641 K07199 - gmx:100777497 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02491 01 124830847 124835639 Aip04g00641 04 7783227 7785475 PCT