Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00631 ATGTCTGGGGTGGATGCTCCTGCTTTTTTAACATGGGAGGAGAGGATTATATGCCATGAGCGTGGGAACCGTGTGATTCACTTCTACTTGAAGGATTCGTTGGGGAATTCGGTTCTTGCTGTTGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACCATTTCTTGCAGACTTATGGATCCGCACATTCCATCAACGCTTGTAAATGGCGGGCGAGGCGAGAGGTCGTTGAGTGGCTTACTTGTTTGGTTTCCAGGAACCATGCACCTGATTCAGGTATTGAGCTGGATGATGCAGCACAAGCTTTAGAATCTCTCAAGCTTGGAAACAGTGCTCATCAAAAAACTTTACCCGACAAACTGATGTCAAGGAAATTGAGATTCCAGAGTTCAGATATTGAATGGTCGGGCGTTGCTTGGTATTGTGCTAAACAGCTGAAGCACTACCCAGGATTTTGTAGGAATGGGACAACCATTTATGTTCATTCGTTTGTATATATTATGGCTGAGGAAGAAAACCACTATCTAGGTTACCTGGAAGATATGTATGAAGACAAGAAGAAACAAAAAAAGGTTAAGGTACGGTGGTTTCACCATGGTCGGGAAGTTAAGAACGTGGTTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATAACACCTCATGTTCAAGTGATCAGTGCTGAGTGTGTCAATGGCCCTGCAATAGTTTTGACCCCTAAGCATTATGAGAAATGCGTGTCTGCTATTCTACATTCCTCATTATCGGAGATCCATATATGCTCTCGGCAGTTCAAAAACAATAAACTTAAGCCCTTCACACTCACTAAGCTGCGCGGATATAGTAACCAATCTGTGCTCTCTTTTCTGGGTGATCCTATTGTTTCCAAGCGAAAAGCCAAGAGTCATAAATTGGACACAGAAGATGATGAGGACTTCGCTCAAGACAATCCTCTAAGGTCGAGCAATAAGAGGGGCAAAATTCCTAAGGGATATCAAGTACTTGAAAACGGTTCTTCTAGTCTGCAAAACTCTGCTCTGAAAAAGAGTGAACAAAAATTCCCAAGTTTGAAATTAACACTTTCAAGGAAAACAATGGGTATCAAGTTTGTTGGACCTAAGCCTCAGCATCAGTTGTCTTTTAATGTCGATGATAAGGTCGAGTTTCTCTGTCAAGATAGTGGCATTAGAGGATGCTGGTTCAGGTGTAAAATTTTGAGTGCATCTCAGAGGCAACTGAAGGTCCAGTACAATGATCTTATGGATGCAGACGACGTAGACAAGCTAGAGGAATGGATCCCTGCAACTAGAGTAGCAGCTCCTGACAAACTGGGTATGCGGTGTTCAGGCCGCTTAACTGTGCGACCATTCCCACCAAAAGATACTACAGATCATGCTTTTGAGATTGGAACTGCAGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTTATAACTGCCATTGATGTTGGTGGAGTAGGAACTCTTCAAGTTTATACACCTGGTGAAGAAAGGCTCCTAACAGTCCAGAAGAAGGACATTCGGATTTCGCGAGATTGGGTTGATAACAGGTGGGTTGATATAGCTGGAAAGCCTAACATTTGCAGCCATTTACCTTCAAATGTTAGTTCTCGTGTTGGGCTGTCGGCTAATTCTGCTGTGGTAGACGGATCTGTGTCCGGTTGTTCTGCTATATTAGAAAGTAAGTCATCATCGATTCCCAAAGTTGAAGTTGCTCCAAAGGTTGAGCAAGAATTATCCGGTTTGGAAGCACCCGAACTGGAAAGTATGAAGGGAGTGGTAACTTTGGGGAAGCCACTAGCTGCCATCGATGAAGACGAGGATATTGACTCTGGTGACGGTGGTTGTGACGGTGAAACTGACAACATTGATGGTGATGGTAAGAAGGCACTCGATACCATTGACAATGAAAAGGATGTCTCTCACGGTGACACAGAAAAAAATGATGACGGCGGTGACAAAGTTGAAAAGAACAATGAGGGAGATTTGATGTTGAAGGAACAACATTTTGATTCTGCAGAACAAAAACTTGATGCAGCAGAAGCAAGTTGCATGAATATCTAA 2100 0.4381 MSGVDAPAFLTWEERIICHERGNRVIHFYLKDSLGNSVLAVVGTERSVRHMMYVVPDHFLQTYGSAHSINACKWRARREVVEWLTCLVSRNHAPDSGIELDDAAQALESLKLGNSAHQKTLPDKLMSRKLRFQSSDIEWSGVAWYCAKQLKHYPGFCRNGTTIYVHSFVYIMAEEENHYLGYLEDMYEDKKKQKKVKVRWFHHGREVKNVVPQLNLQEGEVFITPHVQVISAECVNGPAIVLTPKHYEKCVSAILHSSLSEIHICSRQFKNNKLKPFTLTKLRGYSNQSVLSFLGDPIVSKRKAKSHKLDTEDDEDFAQDNPLRSSNKRGKIPKGYQVLENGSSSLQNSALKKSEQKFPSLKLTLSRKTMGIKFVGPKPQHQLSFNVDDKVEFLCQDSGIRGCWFRCKILSASQRQLKVQYNDLMDADDVDKLEEWIPATRVAAPDKLGMRCSGRLTVRPFPPKDTTDHAFEIGTAVDAWWSDGWWEGVITAIDVGGVGTLQVYTPGEERLLTVQKKDIRISRDWVDNRWVDIAGKPNICSHLPSNVSSRVGLSANSAVVDGSVSGCSAILESKSSSIPKVEVAPKVEQELSGLEAPELESMKGVVTLGKPLAAIDEDEDIDSGDGGCDGETDNIDGDGKKALDTIDNEKDVSHGDTEKNDDGGDKVEKNNEGDLMLKEQHFDSAEQKLDAAEASCMNI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00631 699 MobiDBLite consensus disorder prediction 304 334 - -
Aip04g00631 699 MobiDBLite consensus disorder prediction 304 322 - -
Aip04g00631 699 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 589 - -
Aip04g00631 699 MobiDBLite consensus disorder prediction 616 676 - -
Aip04g00631 699 Pfam BAH domain 162 273 IPR001025 GO:0003682
Aip04g00631 699 Gene3D - 144 370 IPR043151 -
Aip04g00631 699 SMART agenet_At_2 469 527 IPR014002 -
Aip04g00631 699 SMART agenet_At_2 383 448 IPR014002 -
Aip04g00631 699 MobiDBLite consensus disorder prediction 618 632 - -
Aip04g00631 699 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 8 589 - -
Aip04g00631 699 Coils Coil 675 695 - -
Aip04g00631 699 MobiDBLite consensus disorder prediction 633 676 - -
Aip04g00631 699 SMART BAH_4 161 280 IPR001025 GO:0003682
Aip04g00631 699 Pfam Agenet domain 388 463 IPR008395 -
Aip04g00631 699 ProSiteProfiles BAH domain profile. 161 280 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00631 Aip-Chr4 7660220 7666433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00631 397 525 PHD Transcription Factor Family AT5G58610 27.068 2.31e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00631 - - gmx:100816046 913.294