Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00619 ATGCAAACCTCCCAGAAACACTCAACCTCAGCTGGTATTCACATATACCACCAGCCAGTGCAAGGCATTGATCCTTACAATCATTACCAAATATTACAAAGCAATTCATGCCATGATATCCATGACAGTAGCAGCCAGGGGACCAATGTGTCGTTTGAAGCCTCGAAGGAGCAATACTATACCCTTGATTCATCCCCAGCAACCAATGGTCTCATAGGTTGTGATTCACCTTCCTGTGCTAGTGTATCATCCAGTAGGAGCCCTTTATCTCCACAGAATTCTCAGTCATACTATTCAGATCAGCACCAATCTTCTGACAACAACTATGGATCGCCAATAAGCGGTTACTCAAGTGCTGAAGATAGCTATGAATTGAAGAACAAGCTAAGAGAATTGGAGATTACATTATTGGGGCCAGAACCAGATATTGTTGATAGTTGTCACTGCTGCTTCAAGAGTGTTCACCAAGGAGCATCTCCAATGTCGAAGTACAATTGGGTTCAGATTGCTGAGATGATTCCAAAGTTGGACTTGAGAGAAGTCCTTATTCTTTGTGCACAATCTGTGGCTGATGATGACATTCAAACAGCACTAGGGTGGATGGATAATGTGTTGGTGAAGATGGTATCTGTTGCTGGGGATCCAATGCAGCGACTAGGTGCATACATGTTGGAAGGTCTTAGAGCAAGGTTTGAATCATCAGGGAGCTTAATTTACAAGGCATTGAAGTGTGAACAACCAACAAGCAAGGATCTAATGACTTATATGCATGTCTTGTACCAGATTTGCCCGTATTGGAAATTCGCTTACATATCTGCAAATGTTGTCATTGGAGAAGCAATGCAGAATGAAGCAAGGATTCACATAATTGACTTCCAAATTGCACAAGGCACACAGTGGTTCTTGCTCATGCAGGCTCTCGCTCGTAGGCCGGGTGGACCGCCGTTCATCCGTGTCACTGGTATTGATGATTCCCAATCAAATCATGCCAGAGGTGGAGGACTTCACATTGTGGGAAAAAAGCTCTCAGAATATGCTAATTCTCTTGGGGTGCCCTTTGAGTTCCACAGTGCTGCAATGTGTGGATCAGAGGTTGAGCTAGAGAACCTTGTGATTTGGCCCGGCGAAGCTCTTGCCGTGAACTTCCCTTTTGTTCTGCACCACATGCCGGATGAGAGCGTAACCACTGAGAATCACAGGGACAGGCTATTGAGGTTGGTGAAGAGCTTGTCACCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACCTCACCCTTTTTCCAAAGGTTTGTTGAGACCCTTAATTACTACACTGCCATGTTCGAATCCATCGATGTGGCTCGTCCCAGGGACGATAAGCAGAGAATCAGCGCAGAACAGCACTGCGTGGCCCGCGACATTGTCAACATGATAGCTTGTGAGGGCCCTGAGAGGGTGGAAAGGCATGAGCTTCTAGGAAAATGGAGGTCAAGATTTTCCATGGCTGGTTTTTCAGCTTGCCCTATGAGTTCTTCAGCTATGGCTGCAGTTAGAAGTCTCTTGAACGAGTTCAATGAGAATTATAGGGTTGAACAAAGAGATGGTGCTTTATACCTAGGATGGAAGAATAGAGCTATGGCCACTTCTTCTGCATGGACATGTTACTGA 1656 0.4529 MQTSQKHSTSAGIHIYHQPVQGIDPYNHYQILQSNSCHDIHDSSSQGTNVSFEASKEQYYTLDSSPATNGLIGCDSPSCASVSSSRSPLSPQNSQSYYSDQHQSSDNNYGSPISGYSSAEDSYELKNKLRELEITLLGPEPDIVDSCHCCFKSVHQGASPMSKYNWVQIAEMIPKLDLREVLILCAQSVADDDIQTALGWMDNVLVKMVSVAGDPMQRLGAYMLEGLRARFESSGSLIYKALKCEQPTSKDLMTYMHVLYQICPYWKFAYISANVVIGEAMQNEARIHIIDFQIAQGTQWFLLMQALARRPGGPPFIRVTGIDDSQSNHARGGGLHIVGKKLSEYANSLGVPFEFHSAAMCGSEVELENLVIWPGEALAVNFPFVLHHMPDESVTTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFSACPMSSSAMAAVRSLLNEFNENYRVEQRDGALYLGWKNRAMATSSAWTCY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00619 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Aip04g00619 551 Pfam GRAS domain family 178 549 IPR005202 -
Aip04g00619 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
Aip04g00619 551 MobiDBLite consensus disorder prediction 83 113 - -
Aip04g00619 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00619 Aip-Chr4 7534763 7536418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00619 1 548 GRAS Transcription Factor Family AT4G17230 58.439 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip04g00619 GRAS 8.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00619 - - gmx:100819190 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02510 01 125105099 125106676 Aip04g00619 04 7534763 7536418 PCT