Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00538 ATGGCTCTTTCCCGCTTCATTCTTCTCTCTCTCTTTCATCTTTCATTCTCTTCGATCTTCTTAGCTCTTCCTTTTGCACTTGCCAATACTGACCCTTCTGATGTTCAAGCTCTTGGGGTATTATTCAACGCGTTGAATAGTCCATCTGTTCTAACGGGTTGGAAAGTAGGTGAAGGTGATCCGTGTGGAGATGATCTCTCAGGTTTAGGACTCAATGGAACTTTGGGATACCTGCTTTCAGACCTTATGTCACTGAGAAAACTTGACTTGAGTAACAACAAGATCCATGACACAGTTCCCTATCAGTTGCCACCAAATCTTACAAGCCTGAATTTTGCTGGAAATAATTTAAGTGGAAATCTTCCTTATTCCATTTCTGCCATGACTTCACTCAATTATCTGAATGTAAGCAACAATGCACTCTCCACTCCAATTGGTGATGTTTTTGCTAGTCTTTCTGATCTTGGTACCCTGGATCTTTCATTCAATAACTTTTCTGGGGATCTACCTGCTTCATTTGCTTCTTTGTCAAATCTTTCTTCTCTTTTCTTGCAGAGCAATCAATTGACTGGCAATCTTAATACTCTTGTTGGTTTGCCGTTAGATAGCTTAAATGTTGCCCACAATAATTTCAGCGGATGGATACCTCATGAGCTTAGTTCTATCCATAATTTCATATTTGATGGGAATTCTTTTGACAACGGGCCTGCTCCTCCTCCACCACCATTTACATCTCCTCCACCCAGCAGGTCTCACAATAGTCACCGTCGCTCTGGATCTGGTTCCCATAACAAAACACGGGTTTCTGATAATGAAAGTTCTGATAGCAATAATGGCTTGACCACAGGGGCTATTATAGGCATTATTATAGGTTCAATATTGGTGGCTGTTATTTTGATACTTGCTCTTTTCTTCTGTGTCCGAAAGCAAAAGGGGAAGGAAAAGGTTACAAGAACTTCTAGTGGGAGCCTTCCTCATGGAACTACTAATGTGAATCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCAGCTTTGATTACGGATCTCAAGCCTCCACCTGTTGAGAATGTGGTAGTCGAGAGGGCGCCTGTGAAAAGTGGATCTATAAAGCAGATGAAGTCCCCTATAACTTCCACATCATACACAGTTGCTTCTCTCCAAAGTGCAACGAATAGTTTTAGTCAAGAAAATATTATTGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCTGAATTTCCAAATGGGAAGATCATGGCCATTAAGAAGATCGACAACTCAGCATTGTCACTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCAAGGTTACGGCACCCAAACATTGTTACGCTGGCTGGATATTGTGCGGAGCATGGCCAACGCCTTCTAGTTTATGAGTATATAGGAAACGGAAATCTACATGACATGCTACATTTTGCTGAAGATAGTAGTAAGGCTTTGTCTTGGAATGCCCGAGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCTGCAAATATATTACTCGATGAAGAGCTCAATCCTCACCTCTCTGATTGTGGTTTAGCTGCACTAACACCAAACACTGAGCGGCAGGTTTCAACTCAGATGGTCGGTTCGTTTGGTTATAGCGCTCCTGAGTTTGCATTATCAGGAGTATATACTGTAAAAAGTGATGTTTACAGCTTTGGAGTAGTCATGCTGGAACTATTGACTGGTCGGAAGCCGCTTGACAGTTCACGGGTTAGATCAGAGCAGTCGCTTGTGAGATGGGCTACACCCCAGCTCCACGACATAGACGCGTTGGCTAAAATGGTTGATCCTGCTTTGAACGGCATGTATCCTGCAAAGTCGCTTTCGCGCTTTGCTGATATAATTGCACTTTGTGTTCAGCCTGAACCTGAATTTCGACCTCCCATGTCGGAGGTGGTGCAAGCATTGGTACGGTTAGTGCAAAGAGCAAGTGTGGTTAAACGAAGACCAAGTGATGAATCTGGTTTTGGTCACAGGACCCCGGAACATGAGGCCATAGATATGTCTATTTAA 2106 0.4297 MALSRFILLSLFHLSFSSIFLALPFALANTDPSDVQALGVLFNALNSPSVLTGWKVGEGDPCGDDLSGLGLNGTLGYLLSDLMSLRKLDLSNNKIHDTVPYQLPPNLTSLNFAGNNLSGNLPYSISAMTSLNYLNVSNNALSTPIGDVFASLSDLGTLDLSFNNFSGDLPASFASLSNLSSLFLQSNQLTGNLNTLVGLPLDSLNVAHNNFSGWIPHELSSIHNFIFDGNSFDNGPAPPPPPFTSPPPSRSHNSHRRSGSGSHNKTRVSDNESSDSNNGLTTGAIIGIIIGSILVAVILILALFFCVRKQKGKEKVTRTSSGSLPHGTTNVNPQMQEQRVKSAALITDLKPPPVENVVVERAPVKSGSIKQMKSPITSTSYTVASLQSATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGHRTPEHEAIDMSI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00538 701 SUPERFAMILY Protein kinase-like (PK-like) 370 667 IPR011009 -
Aip04g00538 701 PANTHER OS01G0253100 PROTEIN 28 697 IPR045271 GO:0004714|GO:0006468
Aip04g00538 701 MobiDBLite consensus disorder prediction 234 248 - -
Aip04g00538 701 ProSiteProfiles Leucine-rich repeat profile. 84 105 IPR001611 GO:0005515
Aip04g00538 701 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 28 697 - -
Aip04g00538 701 Pfam Protein kinase domain 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00538 701 Gene3D Phosphorylase Kinase; domain 1 356 470 - -
Aip04g00538 701 Pfam Leucine rich repeat 105 165 IPR001611 GO:0005515
Aip04g00538 701 SUPERFAMILY L domain-like 59 224 - -
Aip04g00538 701 ProSiteProfiles Protein kinase domain profile. 393 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00538 701 MobiDBLite consensus disorder prediction 231 277 - -
Aip04g00538 701 Gene3D Transferase(Phosphotransferase) domain 1 471 680 - -
Aip04g00538 701 MobiDBLite consensus disorder prediction 681 701 - -
Aip04g00538 701 CDD STKc_IRAK 399 670 - -
Aip04g00538 701 Gene3D Ribonuclease Inhibitor 31 282 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00538 Aip-Chr4 6452094 6457797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00538 128 700 Strubbelig Receptor Gene Family AT4G22130 71.603 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip04g00538 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00538 - - adu:107482973 1157.9