Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00533 ATGAGCAGAAAGCCAAACGCAAGAAAACAGCAGCATGTTCCATTGATTGATCTCCTTATTCTCTGTTATCTTCTCTTGTTCCCTGCCACAACCACAAAATCCGAAGCTAAATGCAGTTCTGGGTGCAACCTTGCACTAGCTTCCTATTACCTATGGCCAGGAACAAACCTCACTTACATCACCACCATCTTCGGAAAACCACAGTCAGAGATTCTGAAATACAACCCTGAAATAAAAAACCCAGATTCCATTGATAAGCAAGAAAGGATCAACGTTCCCTTCTCATGTGACTGCTTGAACGGTGATTTCTTAGGTCACACTTTTTCATACGAAACACATCGCGGTGACACGTACAATAACATTGCTCATGTTGCTTTCTCAAACCTCACAACTCAGGAGTGGCTGAGTAGGGTTAATAGCTATCCAGCTATAAACATTCCTGATGGTGTTCAGATCAATGTCACTGTAAATTGTTCCTGCGGAGATATACATGTGTCTAAGGATTATGGATTGTTTGCCACGTATCCCCTTAGGATCGGCCAGGATTTGAACACGGTGGCGGCCGAATCCACCGTGCCGGCCGAGTTGCTGCAGAGGTACAATCAGGGCTCTGATTTTGGTGCCGGGAATGGAATTGTTTTTGTGCCGGCCAAAGGAATCTCTGGTGGAGCCATTGCTGGCATAGTTATTGGAGGTGCTGTTACTGGATTATTATTATTGGCACTTGTTCTCTATTTTGCTCTATTTAGAAGAAAGAAAGTGGTGGCTGAGGTGTCCCTTCTCCCTCATGATCAATTTACTCAACTCCAACATGGTTGTGGAAGCAGGTTGAGTAAGGGATCAGAATCTTCCCCTGTGATTTCGCCAAGGTTGACCGGTATTACAGTTGACAAGTCAGTGGAGTTCTCATATGAAGAGTTGGCCAAAGCTACTAATGGCTTTAGCATAGATAACAAAATTGGTCAAGGTGGTTTTGGTTCTGTATACTATGCAGAGCTTAGGGATGAGAAAGCGGCAATTAAGAGAATGGATATGCAAGCATCAAAAGAATTCCTTGCTGAACTCAAGGTTCTAACACGCGTCCATCACTTGAACTTGGTGCGTTTAATAGGATATTGTGTTGAAGGCTCCTTATTTTTGGTTTATGAATACATTGAGAATGGCAATCTAAGTCAACATTTGCGTGGCTCAGGGAGGGATTCATTATCATGGCCTATTAGAGTTCAAATTGCACTGGATTCAGCAAGAGGACTGGAATACATTCATGAGCATACAGTTCCTGTCTATATCCATAGAGATATTAAGTCAGCAAACATTTTGATAGACAAAAACTTTCGCGGAAAGGTTGCAGATTTTGGTCTAACAAGATTGACTGAATATGGTAGCTCTTCATTACAGACACGTCTTGTTGGTACATTTGGCTATATGCCTCCAGAATATGCACAGTATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGTGTTGTTCTCTATGAACTCATATCCGGAAAGGAAGCTATTATCAAGACAAATGAAATTGTGACTGAATCAAAAGGGCTAGTTGCCTTGTTTGAAGAGGTTCTTAGTCAAACAGACCCAAAAGAAGATCTTTCAAAATATGTTGATCCTAGACTTGGTGACAACTACTCTGTTGACTCTGTATTTAAGATGTGTCAACTTGCTAGAGCTTGCACACATGAAAACCCTCAACTAAGGCCAAGCATGAGATCAATTGTGGTAGCATTAATGACACTTTCATCAGCAACTGAGGATTGGGATGTTGGCTCTTTCTATGAAAACCAAGCTTTGGTGCATTTAATGGCTGGAAGGTAG 1839 0.4182 MSRKPNARKQQHVPLIDLLILCYLLLFPATTTKSEAKCSSGCNLALASYYLWPGTNLTYITTIFGKPQSEILKYNPEIKNPDSIDKQERINVPFSCDCLNGDFLGHTFSYETHRGDTYNNIAHVAFSNLTTQEWLSRVNSYPAINIPDGVQINVTVNCSCGDIHVSKDYGLFATYPLRIGQDLNTVAAESTVPAELLQRYNQGSDFGAGNGIVFVPAKGISGGAIAGIVIGGAVTGLLLLALVLYFALFRRKKVVAEVSLLPHDQFTQLQHGCGSRLSKGSESSPVISPRLTGITVDKSVEFSYEELAKATNGFSIDNKIGQGGFGSVYYAELRDEKAAIKRMDMQASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDSLSWPIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTRLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISGKEAIIKTNEIVTESKGLVALFEEVLSQTDPKEDLSKYVDPRLGDNYSVDSVFKMCQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMAGR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00533 612 CDD STKc_IRAK 320 581 - -
Aip04g00533 612 Gene3D Phosphorylase Kinase; domain 1 299 384 - -
Aip04g00533 612 SMART serkin_6 314 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00533 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 23 612 IPR044812 GO:0019199|GO:0045087
Aip04g00533 612 ProSiteProfiles Protein kinase domain profile. 314 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00533 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Aip04g00533 612 Gene3D Transferase(Phosphotransferase) domain 1 385 602 - -
Aip04g00533 612 Pfam Protein tyrosine and serine/threonine kinase 315 583 IPR001245 GO:0004672|GO:0006468
Aip04g00533 612 ProSitePatterns Protein kinases ATP-binding region signature. 320 341 IPR017441 GO:0005524
Aip04g00533 612 SUPERFAMILY Protein kinase-like (PK-like) 289 584 IPR011009 -
Aip04g00533 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 23 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00533 Aip-Chr4 6305208 6316915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00533 13 612 Receptor kinase-like Gene Family AT3G21630 56.960 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip04g00533 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00533 - K13429 gmx:100802308 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00533 04 6305208 6316915 Aip04g00533 04 6305208 6316915 ECH