Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00530 ATGTTGCTGGAGAACTTCAAAGAACATCTTGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGGTACTATTTGGAGTTGCAAGCTAGAGGAATTAACAATAAGCATACTCTTGCTTATCAGAGTCGAGTGGGCCCGGTACAGTGGTTGAAACCATATACAGATGAAACTCTCGTTGAGCTTGGTCAGAAAGGTGTGAGGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATAGAGACCCTTAAAGAAATTGACATGGAGTACAGGGAGTTTGGACGGTGCATGTGA 540 0.4593 MLLENFKEHLALSVRSIQWSYAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKAVEASPQTKRRSAALSPEDLTDTEWYYLELQARGINNKHTLAYQSRVGPVQWLKPYTDETLVELGQKGVRSLLAVPVSFVSEHIETLKEIDMEYREFGRCM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00530 179 PANTHER TRANSCRIPTION FACTOR EGL1 5 106 - -
Aip04g00530 179 SUPERFAMILY Chelatase 103 174 - -
Aip04g00530 179 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 154 IPR025610 -
Aip04g00530 179 Pfam Ferrochelatase 109 174 IPR001015 GO:0004325|GO:0006783
Aip04g00530 179 CDD Ferrochelatase_C 113 174 IPR033644 -
Aip04g00530 179 Gene3D - 78 178 - -
Aip04g00530 179 PANTHER TRANSCRIPTION FACTOR TT8 5 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00530 Aip-Chr4 6258245 6259841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00530 4 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 65.138 7.86e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00530 - - aip:107636116 331.643