Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00505 ATGAAGAGTGAAGACGAGCGCGTTCTCATAATCGTCAAAGCTTCACCAACTACAAGTATGTCAGCGTCGTCGTCATCTTCTTCTTCTTCTTGTTCTTCTTTCTCTCTAGCTAGCAGTGTTGAGCCTTTATCAACAGCTCTAAGCTTGAAGGCACCAATGGTTAGGCCTTATGTAAGATCCAGAATGCCTCGAATTTGTTGGACACCAGATCTCCACCGTTGCTTCCTGCATGCAATTCAAAGGCTTGGAGGAGTAGATAGGGCGACGCCAAAGATGGTTATGCAGCTAATGAATGTTAAGGGGGTTACCATATCTCATGTTAAAAGCCACCTACAGATGTACAGGAGCGTGAAGCAGGAAGAGATGAAACAAGCCGAAAGGAAGAAGAAAATAACGGCATCACAAGAATTGCTGCTTTCTTCATTAAGGTGGAACGGTCAACAGAGTCTTCTGCAAGGGAGCTGTTGTGGAATTAGTCATTATACCGAAGAATTTGCTCGCACCAAACTCCAAGATCTTTGGAATGAGCAGCAGCAGCAAGAGTCTGAGAATTATGCAAAGCTAGGGAGTAATCAGTCGATTATAGTTTGTAAGGAGAATGATGAACAGAAGACTCACACTTACATCATTTTCCGAGATATTCTCACACCCCACACTGCCCAAGGGAACAATAAGGATGGTGGGGGTAGAAAGGTGTCATCATCAGAAGAGATTGGTACAAGTAGCAGATTCGAAGACAGAAGCGAGAAAGGAAAGAGAGTGAGAGTGTGTGATGAAGGAAAAAACAACATGGCGTCTCTGTCACAGATGATGAGTCCAGTTAGGAATGATATCTCCCTTGAGCTCAAGCTTTCTTTATCACATCATCATCATATGGCATAG 882 0.4365 MKSEDERVLIIVKASPTTSMSASSSSSSSSCSSFSLASSVEPLSTALSLKAPMVRPYVRSRMPRICWTPDLHRCFLHAIQRLGGVDRATPKMVMQLMNVKGVTISHVKSHLQMYRSVKQEEMKQAERKKKITASQELLLSSLRWNGQQSLLQGSCCGISHYTEEFARTKLQDLWNEQQQQESENYAKLGSNQSIIVCKENDEQKTHTYIIFRDILTPHTAQGNNKDGGGRKVSSSEEIGTSSRFEDRSEKGKRVRVCDEGKNNMASLSQMMSPVRNDISLELKLSLSHHHHMA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00505 293 MobiDBLite consensus disorder prediction 219 261 - -
Aip04g00505 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 19 286 IPR044848 GO:0003700
Aip04g00505 293 Gene3D - 62 119 - -
Aip04g00505 293 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 19 286 - -
Aip04g00505 293 MobiDBLite consensus disorder prediction 240 259 - -
Aip04g00505 293 SUPERFAMILY Homeodomain-like 61 119 IPR009057 -
Aip04g00505 293 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Aip04g00505 293 MobiDBLite consensus disorder prediction 219 239 - -
Aip04g00505 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 119 IPR017930 -
Aip04g00505 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 116 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00505 Aip-Chr4 6013005 6015636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00505 54 120 G2-like Transcription Factor Family AT2G42660 68.657 1.98e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip04g00505 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00505 - - adu:107482892 484.182