Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00471 ATGATGATGTCTTCAGTGAAGTTAACAGCGTCATCACCTTTCTCTTCTGCTTTCAGAAGCAGAAAGAATAACAAGCTTCCTAATCTCCAAACAAGGTCTCAACTTTCCACATTACCCACCATTCAAATCGCAAAACAAAACTTGGGTCACTCTCCATTCTTCACCCACAAGCCTCTCCACCTATCATCCAGCATTGTGTGCCAGGCCTATGAAGCTGACAGGTCAAGGCCATTGGAGATTGAGATTCCTGATGAAGAGGTTGCTAAGAAGCTCAAGATGGGACTCTACTTTGCTTCATGGTGGTCTCTTAATGTGGTCTTCAACATATATAACAAGAAGGTCCTCAACGTTTTTCCTTATCCATGGCTTACCTCAACTCTCTCCCTGGCTGCTGGCTCCCTCATCATGTTGATTTCGTGGGCCACAAAGGTTGCTGAACCACCTAAAGTCAACTTGGACTTCTGGAAGGCCCTTCTTCCTGTTGCAGTGGCACACACAATTGGGCATGTAGCAGCAACAGTGAGCATGTCAAAAGTTGCTGTTTCATTCACTCACATAATCAAGAGTGGAGAGCCTGCTTTCAGTGTCTTGGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCTTTGCCGGTTTACCTCTCATTGCTGCCAATCATAGGTGGTTGCGCACTCTCCGCAGTAACGGAGCTCAATTTCAATATGATTGGGTTTATGGGGGCCATGATATCAAACATGGCATTTGTGTTTAGGAATATATTCTCAAAGAAAGGGATGAAGGGCATGTCTGTTAGCGGAATGAACTACTATGCTTGCCTTTCAATCTTGTCTCTATTGATCCTAACACCTTTCGCCATTGCTGTTGAGGGCCCCAAGCTCTGGGCTGCTGGCTGGCAAAAAGCTCTCTCTCAGATTGGTCCCAACTTTATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCACTTGTATAATCAAGTGTCATACATGTCCCTTGATCAAATTTCACCCTTAACATTTAGCATTGGAAACACAATGAAGAGAATCTCTGTGATTGTCTCTTCCATCATTATCTTCCACACGCCAGTTCAGCCCATCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTGA 1155 0.4502 MMMSSVKLTASSPFSSAFRSRKNNKLPNLQTRSQLSTLPTIQIAKQNLGHSPFFTHKPLHLSSSIVCQAYEADRSRPLEIEIPDEEVAKKLKMGLYFASWWSLNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLIMLISWATKVAEPPKVNLDFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLLPIIGGCALSAVTELNFNMIGFMGAMISNMAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKLWAAGWQKALSQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00471 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 381 - -
Aip04g00471 384 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 30 383 - -
Aip04g00471 384 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 91 383 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aip04g00471 384 Pfam Triose-phosphate Transporter family 91 380 IPR004853 -
Aip04g00471 384 PANTHER SOLUTE CARRIER FAMILY 35 30 383 - -
Aip04g00471 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00471 Aip-Chr4 5543547 5545908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00471 56 384 Antiporters AT1G61800 81.009 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00471 K15283 - gmx:100804205 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02659 01 127275100 127277580 Aip04g00471 04 5543547 5545908 PCT