Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00459 ATGAAAATCTTTCTTTTCGTGAAGAATAAAGTTGGTGATTTCGGATTGGTCCCGACTTGCATTGAATGTTGTGAAAACGAAGCTTTACTTCCATTTGCCAGTGTTGGTCAGAGCCATAAGAACATTTCATTGGGTTCTTCCCACACTGCACAAGCAGGTAATTCCACTTGGGCAGTATCACCATCTGGTAACTTTGCAGTTGGTTTCCAACAGATTGAGGAGAATGGGTTCTTGCTATCCATTTGGTTCAACCAAATACCGGAAAGGACCATTGTTTGGTCTGCCAATGGAGGAAACCTTGCACCAAAAGGTTCCAAAGTTGAGCTTACCTCAGATGGATTTTTCTTGCTGAATGATCCCACCGGCAACCGAATATGGTCTGCTGGATCCTCCGGCAGTGGAACATCCCATGCTGCCATGGTTGATACCGGCAATTTCGTGTTGGCGAGTCAAAGCACCGAGTACTTATGGCAAAGTTTTGATCATCCCACTGACACAATCTTACCAGGACAAGTTCTAAATCAACCAAGTACTCTTGTTTCTAGATATTTGGAAACAAATTACTCAAGTGGAAGATTTAAGTTTATATTAAAAGATGATGGGAACCTTGCACTTTATACTACACAGTATCCGTGGAGCTCTTCAAATTTTAATTATTGGAGTACACATACTTCTGGCAGTGACTTCTCATTAGTCTTCAATCAATCTGGGGTTCTTTTCCTTCGGGCAAACAATGGAAGCATAATCAGCATGATATCATCAAAGACTGCTTCCACCCAAGATTTCTACCAGAGAGCAGTGCTTGAATATGATGGAGTTTTCAGGCATTATGCCTACCCGAAGAGCAGTAACTCCAATACAAGAAGCTGGAAGATGGCATGGTCAACTGTTTATTACTTACCGCCAAATATCTGCTTGGATATTAGGGAAGATTATGGCAGTGGAGCTTGTGGATTCAACAGTTATTGCACTTTTGATGATGGGAAAAAGAGTTGCCATTGTCCATCTGGATATAGCTTCATTGATCCAGCTGATGTGATGAAAGGATGCAGACCGGACTTTGATTCACAAAGTTGTGATGGATCTTCCCCAGAAACAGATCTTTTTGATTTCTATGAGATGGAAAATACAGACTGGCCTCTGACAGATTATGAATATTTTGAGCAAGCGAATGAGGACTGGTGCAGACAGGATTGCTTGAGTGATTGTTTCTGCGCTCTTGCCATTTTTAGAGATGCTGGGTGTTGGAAAAAGAAGTTACCCTTCTCCAATGGAAGGAAAGATCCCAGTTTTCAAGCAAAAGCTCTGTTAAAGATAAGAAAAGATAATTCTACCTCCAAATTTGTATACTGGTGGAGATCTAAGAGTTCTAAGGCAAATCAACCTAGCCAATCCATTGTAGGCACTTGTCTTAGAAGTTTCACTTTTGAAGAGTTGAGGAAGGCAACGAATGGGTTCGAGGAGGTGCTTGGTCAAGGGGCATTTTCAACTGTCTACAAAGGAGTTTCATTTGATCCTACCTGGAGCCACATTGCAGTTAAGAAGCTAAACAACATGGTCAAAGAAAATGAAGAAGAGTTCAAAACAGAGGTAAGTACATTTGGTAGGACAAATCATAGGAATTTGATCCAACTCTTGGGATTTTGCAATGAGGGAGACCACAGAATGCTTGTATATGAGTTCATGAGCAAAGGTTCTTTGGCAAGCTTCCTTTTCGACACCACCGAAAGGCCTAGTTGGTTTCAGAGAATGCAGATAGCATTGGAGACAGCTAGGGGAATCTTGTACTTGCATGAAGAGTGTAGCACTCAGATCATACACTGTGACATTAAACCTCAAAATGTTTTGCTTGATGAATCTTTCACTGCTAAGATATCTGACTTTGGCTTAGCCAAACTTTTGAAAATTGGTCAATCCAGAACCAATACAGGGATAAGGGGAACCAAAGGGTATGTTGCCCCTGAGTGGTTTAGAAACATGCCAATTACCATCAAGGTTGATGTCTACAGTTATGGAGTGCTATTACTAGAGATCATTTGTTGCAGGAGGAGCTTTGAAGCAAATGCTGAGAATGAGAACCAGATGGTGCTGACAGATTGGGCCTATGATTGCTTTCATGAAAGGAAACTTGATTTGTTGGTGAAAGATGACAAAGAGGCCTTAGCTGACATGAAGATGGTTGAAAAGTATGTGATGCTTTCTTTATGGTGCATTCAGGAGGATCCATTACTGAGGCCATCCATGAAGAAAATCTTGCAGATGCTTGAAGGGTCTATAGATGTACCCGCCCCTCCTGATTTACCTTCATTGATAACTACCATCAGTCTGTAG 2331 0.4144 MKIFLFVKNKVGDFGLVPTCIECCENEALLPFASVGQSHKNISLGSSHTAQAGNSTWAVSPSGNFAVGFQQIEENGFLLSIWFNQIPERTIVWSANGGNLAPKGSKVELTSDGFFLLNDPTGNRIWSAGSSGSGTSHAAMVDTGNFVLASQSTEYLWQSFDHPTDTILPGQVLNQPSTLVSRYLETNYSSGRFKFILKDDGNLALYTTQYPWSSSNFNYWSTHTSGSDFSLVFNQSGVLFLRANNGSIISMISSKTASTQDFYQRAVLEYDGVFRHYAYPKSSNSNTRSWKMAWSTVYYLPPNICLDIREDYGSGACGFNSYCTFDDGKKSCHCPSGYSFIDPADVMKGCRPDFDSQSCDGSSPETDLFDFYEMENTDWPLTDYEYFEQANEDWCRQDCLSDCFCALAIFRDAGCWKKKLPFSNGRKDPSFQAKALLKIRKDNSTSKFVYWWRSKSSKANQPSQSIVGTCLRSFTFEELRKATNGFEEVLGQGAFSTVYKGVSFDPTWSHIAVKKLNNMVKENEEEFKTEVSTFGRTNHRNLIQLLGFCNEGDHRMLVYEFMSKGSLASFLFDTTERPSWFQRMQIALETARGILYLHEECSTQIIHCDIKPQNVLLDESFTAKISDFGLAKLLKIGQSRTNTGIRGTKGYVAPEWFRNMPITIKVDVYSYGVLLLEIICCRRSFEANAENENQMVLTDWAYDCFHERKLDLLVKDDKEALADMKMVEKYVMLSLWCIQEDPLLRPSMKKILQMLEGSIDVPAPPDLPSLITTISL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00459 776 Gene3D Transferase(Phosphotransferase) domain 1 562 766 - -
Aip04g00459 776 CDD B_lectin 59 163 IPR001480 -
Aip04g00459 776 SMART serkin_6 484 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00459 776 Gene3D - 40 161 IPR036426 -
Aip04g00459 776 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 450 769 - -
Aip04g00459 776 Gene3D Phosphorylase Kinase; domain 1 446 561 - -
Aip04g00459 776 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 27 447 - -
Aip04g00459 776 ProSiteProfiles Protein kinase domain profile. 484 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00459 776 SMART blect_4 41 163 IPR001480 -
Aip04g00459 776 ProSitePatterns Protein kinases ATP-binding region signature. 490 515 IPR017441 GO:0005524
Aip04g00459 776 SUPERFAMILY Protein kinase-like (PK-like) 459 756 IPR011009 -
Aip04g00459 776 PIRSF SRK 19 471 IPR024171 GO:0004674
Aip04g00459 776 PIRSF SRK 451 775 IPR024171 GO:0004674
Aip04g00459 776 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 450 769 - -
Aip04g00459 776 Gene3D - 163 288 IPR036426 -
Aip04g00459 776 Pfam D-mannose binding lectin 90 174 IPR001480 -
Aip04g00459 776 Pfam Protein kinase domain 487 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00459 776 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 27 447 - -
Aip04g00459 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 217 IPR036426 -
Aip04g00459 776 CDD STKc_IRAK 490 757 - -
Aip04g00459 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 186 284 IPR036426 -
Aip04g00459 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Aip04g00459 776 ProSiteProfiles Bulb-type lectin domain profile. 41 161 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00459 Aip-Chr4 5457498 5461411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00459 449 760 Receptor kinase-like Gene Family AT5G45780 40.938 4.05e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip04g00459 Pkinase 9.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00459 - - adu:107482645 1489.55