Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00442 ATGGCTAGAATATTATTGAGTATGATATTCCTACTTTGTATCATGGAGGGAGAGTGCCACAATAATAAATATGAGTGTGGAAGACACCGTTGTGGACCACAAGGTCCTCCAATTCGTTTTCCATTCCGTCTTAAAGACAAGGAGCCTCTAGAGTGTGGTGTACCTGGCTTTGATCTCACTTGTGATCATAAGCATAACACCCTCATTGAGTTTTCTTCTTCTGTTCCTCAACTTTCAATTAAACTCCTTGTCATGGAAATAGGTTATGAAACCAACTTTCTATACCTCTCTGACCCCGAAAATTGTCTTGCCAGCAAATTTCTTAAACTAATTAATACTTCTATTTCTCCTTTTCAATTCCAATTTTATAATGATGATGGTCCATTTTCTATATCTATCTTTAATTGCTCACCCGACGAGCAATATCACTTCTCGTGCCCTGTTTATGTTGCTTCTGACGAGAGCGAGACACTCCTCGGTTCCAACCTTGTATCTTGCACCAAGGTGTTTAACTTGTCCACAAAAATCACGGGCATAGACTCCCTCATGAAAAATCGATTGTTGTTAGAGTGGCCGAAACCGAATTGTACTGTCTGTGAGGCGAGTGGCAAGCAATGCATGCTAAAGAACAATGGTTCCAATGCTGCTTCTGTTGAATGCTATGGGAGTATAACTGGTCCCATGCTAACCAAGAAGATACTCTTTTACATTGCAGGTCCCGCATTTGGATCGTTGCTGCTGCTGCTATTGGCTTTTATGTTGTTTAAGAGCTATCGATACTTCAGAATGAAGGGAGATCAAGCAAGGAGTGCCAAGTTCTTGGAGGATTACAGAGCCCTCAAACCTACTAGATTCTCATACGCTGATATTAAGAGAATCACAAATGGTTTCAAAGACAAGTTAGGGGAAGGAGCCCACGGTGCAGTCTTCAAAGGCAAGCTCTCAAACATTATTGTCGCAGTGAAAGTACTCAACAATACCATAGAGGATGAAGGGAAAGATTTCATCAATGAGGTTGGAACCATTGGCAAAATTCACCATGTTAATGTGGTTCGCTTGCTTGGCTTTTGCGCTCAAGGATTCCATCGTGCTTTAGTCTATGATTTCTTCTCAAAAGGATCACTTGAGAACTTCATCACCACACCAGACAACAATGACATTTTCCTTGGATGGGACAGGTTGCACCAAATTGCTCTTGCTATAGCAAAAGGCATCGAGTATCTTCATCATGGTTGTGAGCAGCAAATCCTTCATTTTAACATCAATCCCCGTAACATCTTGCTTGATGACAGATTCACACCCAAGATTACTGATCTTGGATTAGCCAAGTTATGTTCCAAGGACAAAAGTGCAATGTCAATGACCGCAGTTAGGGGAACCTTGGGCTACATTTCTCCTGAAGTTGTATCAAGAAACTTTGGCACTGCCACCAACAAAGCAGACATTTACAGTTATGGAATGTTGCTACTTGAAATGGTGGGAGGGAGAAAGAATATGGTTACAGGAGAAGAGGGACGTTCTCACATCTTGTATCCTGAATGGGCGCATAATTTGATTGATGGGGGAGATGTACATGTGCATGTTGAAGATGAGCATGATATTAAAATTGCAAGGAAGATTGCAATTGTGGGACTTTGGTGCATTAAGTGGGATCCATCAAACCGTCCATCTGCCAAAACTCTTGTAAAAATGCTTGAATCAGATGGAGATAAGCTCACAGTTCCTTCTAATCCTTTAACTAATAACTCCAGTAATTCTAGGGGGTGTTTGTCATTGGAAGGAAAAAAGCACGTTTAG 1797 0.4124 MARILLSMIFLLCIMEGECHNNKYECGRHRCGPQGPPIRFPFRLKDKEPLECGVPGFDLTCDHKHNTLIEFSSSVPQLSIKLLVMEIGYETNFLYLSDPENCLASKFLKLINTSISPFQFQFYNDDGPFSISIFNCSPDEQYHFSCPVYVASDESETLLGSNLVSCTKVFNLSTKITGIDSLMKNRLLLEWPKPNCTVCEASGKQCMLKNNGSNAASVECYGSITGPMLTKKILFYIAGPAFGSLLLLLLAFMLFKSYRYFRMKGDQARSAKFLEDYRALKPTRFSYADIKRITNGFKDKLGEGAHGAVFKGKLSNIIVAVKVLNNTIEDEGKDFINEVGTIGKIHHVNVVRLLGFCAQGFHRALVYDFFSKGSLENFITTPDNNDIFLGWDRLHQIALAIAKGIEYLHHGCEQQILHFNINPRNILLDDRFTPKITDLGLAKLCSKDKSAMSMTAVRGTLGYISPEVVSRNFGTATNKADIYSYGMLLLEMVGGRKNMVTGEEGRSHILYPEWAHNLIDGGDVHVHVEDEHDIKIARKIAIVGLWCIKWDPSNRPSAKTLVKMLESDGDKLTVPSNPLTNNSSNSRGCLSLEGKKHV 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00442 598 Gene3D Phosphorylase Kinase; domain 1 269 369 - -
Aip04g00442 598 MobiDBLite consensus disorder prediction 573 590 - -
Aip04g00442 598 SUPERFAMILY Protein kinase-like (PK-like) 279 566 IPR011009 -
Aip04g00442 598 MobiDBLite consensus disorder prediction 573 598 - -
Aip04g00442 598 Pfam Protein kinase domain 298 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00442 598 Pfam Wall-associated receptor kinase galacturonan-binding 26 97 IPR025287 GO:0030247
Aip04g00442 598 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 585 IPR045874 GO:0004672
Aip04g00442 598 ProSiteProfiles Protein kinase domain profile. 295 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00442 598 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Aip04g00442 598 PANTHER RECEPTOR-LIKE KINASE 16 585 - -
Aip04g00442 598 Gene3D Transferase(Phosphotransferase) domain 1 370 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00442 Aip-Chr4 5263635 5266657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00442 1 584 Receptor kinase-like Gene Family AT5G38260 31.688 1.02e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g00442 Pkinase 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00442 - - adu:107482548 810.446