Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00434 ATGATTATCTCGGTATCTGGCTCCTCAGCTTGCAAACAAGTACAAGAGCCTCTAGTAAGTTTCCAAAAGGGATTTACAAACATGTTATATAATCGGAACAATAATAATAAGGATAAGGTGGTGGTGATATTGGGGGCCACCGGAACCGGAAAGACCAAGTTGGCCATAGACCTTGCCAACCACTTCCCACCGGCTGAGATTGTTAACTCCGACAAAATGCAAGTCTACAAGGGCCTTGACATCACCACTAATAAGGTAACTCCTCAAGAGGCTCGTGGGGTCCCACATCATCTACTTGGCACACTTCACCCCAATGCCAACTTCACCGCCCTTGATTTTTGCCGCCAAGCCACCTCCGCCGTCGATTCCATCGTTGCCCGAGATGCCCTCCCCATCATCGCCGGTGGCTCCAATTCCTATCTTGATGCTCTCATCAACCACCACTCCACCTTTAGATTAAGGTATGAGTGTTGCTTCCTATGGGTGGATGTTTCAATCCCCATACTGCATGCGTCGCTTCGATCACGCGTGGATCGCATGATCGAAGCGGGACAAGTGGAGGAAGTGCGGAAATTCTTCGAGCCATTGGCAGATTACGAGAGGGGAATAAGAAGGGCGATAGGGGTGCCAGAGTTCAACGAGTTTCTAAGAGCAGAGGCCTTAGGAGCAGATGAAGAGACAAAGAAGATGCTCTTAGACATAGCCATTGCAAGAATCAAGGTCAACAACTGCACCCTCGCCAATCGCCAAATCCAGAAGATTCAACGACTCCACAACACGTGGAAGAGGACCATGCATCGCCTTGACGCCACGCAGGTTTTCTTGAACCGTAATTGCTCTGATCATCACCAATCTCAAAATTCCTGGGAGGAACATGTTCTTGCCAAGAGCCTTAGGATTCTTCACAAATTCCTCTACGAAGATAACAATAAACATCTTCTTGTTCCTTCCGGAATTAATGTTTCTTCTTCTTCGCCGCCGGTGGCAATGGCTGCCGTGGCGGCAGCTGCCACGCATTAG 1020 0.4892 MIISVSGSSACKQVQEPLVSFQKGFTNMLYNRNNNNKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTPQEARGVPHHLLGTLHPNANFTALDFCRQATSAVDSIVARDALPIIAGGSNSYLDALINHHSTFRLRYECCFLWVDVSIPILHASLRSRVDRMIEAGQVEEVRKFFEPLADYERGIRRAIGVPEFNEFLRAEALGADEETKKMLLDIAIARIKVNNCTLANRQIQKIQRLHNTWKRTMHRLDATQVFLNRNCSDHHQSQNSWEEHVLAKSLRILHKFLYEDNNKHLLVPSGINVSSSSPPVAMAAVAAAATH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00434 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 312 IPR039657 -
Aip04g00434 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 151 IPR027417 -
Aip04g00434 339 Gene3D - 37 305 IPR027417 -
Aip04g00434 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
Aip04g00434 339 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 312 - -
Aip04g00434 339 Pfam IPP transferase 153 252 - -
Aip04g00434 339 Pfam IPP transferase 74 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00434 Aip-Chr4 5100572 5103058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00434 154 305 C2H2 Transcription Factor Family AT2G27760 29.213 1.09e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00434 K10760 - gmx:100812928 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00434 04 5100572 5103058 Aip04g00434 04 5100572 5103058 ECH
Aip01g02691 01 127644339 127644785 Aip04g00434 04 5100572 5103058 PCT