Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00376 atgggTCGCAATCCCACCAGCCACCAGCACCGAAGCCTTCTTCCCAGTTCCCAGCGAGCACCGACCCAGCAGGCAGCAGCATTATTCCCAGCAGCGCCCAGCGTCGCCAGCGAGCACCGACCCAGGAACGTTCTTCCCAGCAGCGCCGAGCCACCGACCCCAGTTCCCACCGAGCCTCCATCGTCTTCTTTCCCACTGTATGGAATGGATTCACCTTTGATCGTCCCCAACTCTGATGATGAAGAGAATGAGCCACTTGCCAAAAGGAGGAACCGACAATTCCAACAAAAGGGTTCGCCAAATGATGACTGCCCAGCAGAGATCGAGGACAATGTCGAACGTGAAGGGGCCACGAAGATCACCCTAGCCACAAGGAATCAGCTCCATGTACCCCATCCTTGGCACTTGTCCAGCTTATCGAGTACAACTTTGACAGGCAAGTTGTGTATTGTTTACTTTGTGTGTCCGAAATTCGAAGAAATGTTGGCAACTGTTGAACAAGGGCAAAACAAAAGGCCCATAAGCATGGAGCCCCTTCAAACAGTGATGCCAAAGAAGCCACGTCACCATACTCTGAGTCCAGGAAAACCCAGCTTCTCACTAGGGTTGACTCAGCTTGAGAAGACACCAACCCCATCTCTAACACCTTCGATTCATCCGAGGCTTAGGAATATAGAAAAGGGAGAGCATAAGGATAAACAAATCAGAAGATGGATACTGAACTCGTCCCTAGACAAAGAGGAACCTTTGGCAGCCTTCAAAGGTTGGGAGCATCTAGTTGAAACGGTCACACAGGTGCATAATATAGAGTCATTCAAAGATGGTGCAAATCCGGTGTATGTGGGATTTGGTCCACGCTTTGGTGAGGCTAATAGCAAAGCGACTTGTGATAATCGACTTGTGATAATTGACAGTATGTACTCCATTGTGCCTGGTGATGATCGGGATAAACTGGATGCATATGTGGATATCCTTAGAACAATCAGGTTGGAGTTGATGTTAGACATTGTCTGTGGGCCACAAAATGCATTGGTTGATCAGGTGCTTTCATTATTGGAGGACAAAGCTGAACCCGTACACCGCAATCAACCACGAAACAAGCGAAAGGAAGTGAGATCACCATTCACAGCACCTAGCACGAGGACATTAACACGACGTGCCGAAGGATTACCAACTGCGAAAAAGTTCAACACAGTTGGGGAAGAAGAAAATACTAGGAAGAAAATTACGCAGCAGTCGCATGGCTTTGCAGATTTTCTCCCTCTCTTCTTTTTGGGTCAATCTGAATGCGAGGACTATCGCCTATCCATACCACTAACGTTGGGTTTGAAATCTGAACTTTTGATGGATTGCAATAAAGAAGAGGCTTTAAGGGCCAAGGTTCTTGCAGAACAGAAGATGCAAAACAGGGATTTCCCAGAGCAAAAATTGTACGGTAATGAGATGAACTGGTATAAAATTCTTCAGATTGAGGTGACAGCTGATGAGGCAACAATTAAGAAGCAGTACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTATGCTGGTGCAGAAGCAGCATTCAAGCTGATTGGGGAAGCACAACGAATCCTTTTGGATAGAGAAAAACGCTCTGAGCTTGACAGGAAGTTCCGGGTTGTAATGCACGGGCCTTCTATGGCACCTCATCATCAACAGAAGTTTCAGATGAATTATAATTCTGTAACACAAAACACTGTGAGGCCAAATTTTACGACCTTTAATCCTTGGCAGCAGCAACAACAGCCTTCTCAAACATCTCAACAGGGGATCAATGGTGACCGCGCTACCTTTTGGACTGCATGCTCATTTTGTTCGGTTAGATATGAGTATTATAGGGAAGTTTTGAATAGATCTCTTCGCTGTCAACATTGCAATAAGCCCTTTATTGCATATGATGTCGATGTTCAAGGTACAACCCCAGCAACTAATCTAAGTCAGCAGACTTTCACCCAGCGGACATATGGCCTCAATCATGGTGCCGTGAAGGTGGATTTTGGAGCTCAAGCTAATCTGCATACAAAGAAGTCCGACACAGAGTCTAGGGCAAACAAAGGCTCTACTTCTGATGTCTCCAAAAAGCCAAATGGAAAGAGGAGCAGGAAGCAGATGGTTGAATCCAGTGAAAGTTCTGATTCGTTTAGCAGTGATTCTGACGATATGTTTGCTAACGATGATGGTTTTACTGATTTGGAGAAGAATTCGGCTTCTAGAGAAGAGCATCCGCGGAGGTCTACACGGCAAAAGCATCAGGTTTCCTACAATGAGAATGCAAGTGATGACGACGATGATGAATCATTTGAGCCTTCAAGAATCAATACGGGGAATGAATCATCAAACCCTGCTAATGAAATGAATATTCAAAATGGTTTAGCGTCTGCTCTGAAAGATAATAAAAAAGGTGTAAAGCGAGACTCTGAAGAGGACTTGGTAAATAGAAATGCGAAAATTAAAGAAGTGAGGGGTGAAGAAGTAGTGGGAGATTCAAAAGTAGATGAAGCTTCAGAGAATGATGTCTATCCTGATCCAGAGTTTAGTGACTTTGACAAGGACAAGAAAGAGGAATCTTTTGCTGCTGGGCAGATTTGGGCTATTTATGATATGGCAGATGGCATGCCAAGATTTTATGCTTTGATAAAAAAAGTTATGTCTCCTGGGTTCAAGTTGCGGATAACATGGCTTGAACCAGATCCAGATGACGATGATGAAATCAGCTGGTCGATTCAGGAATTGCCAATTGCATGTGGAAAGTATAAACTTGGTAGCAGTGACATCATTGAAGGCCATGAGACGTTCTCGCATATGATTACTTGTGAAAAGGTTGGCCGGAGCTCTTTCAACGTGTACCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAACTGGGATATTAAATGGCATAAGGATGCAGAATCCCATCGGAAGTTTGATTTTGAGTTTGTGGAAATCTTGTCAAATTATGTTGAAGGTGACGGAGTATTTGTTGCATTATTGGGGAAGTTGAAAGGCTTTGTGAGTCTCTTCTTTCCTATTTTGAAGGACGGTAATCCATTATTTCAAATACCATCAACACAGTTGTTCAGATTCTCTCACAGGGTTCCGTCTTTTCGGATGACTGGTCAGGAAGGAGTAGGTGTTCCTATGGGATCTTTAGAACTTGATCCTGTATCCTTGCCTACGAATCTGGATGAGATTGAACTTCCTGGAGAATTAATAGGGAAAACTAGTCAAAGTCCATCTGTTGGGATGAGTTCAAGGTCTTCAGATGCCTTAAAATTCATGATGAAATCTGACACACATGCATCTACTTCTAAGATTAACTTGGAAGGTCAAAATTCAACACTAAGGACCAAGGCTCCTGTTGATCATATTGCTAATGGTAGTGCTCCTTCAGCTTCAGTGGCAGCAGCTATTCAAGTACCCAAACAGCAGTTCTTCAATTTTGATGAGGAGAGATCAAAGGTTGGCGTTGGTCAGGTTTGGGCTTCTTATGGTGGACAGGATGGAGCACCAAGATACTGCTGTTAA 3555 0.4408 MGRNPTSHQHRSLLPSSQRAPTQQAAALFPAAPSVASEHRPRNVLPSSAEPPTPVPTEPPSSSFPLYGMDSPLIVPNSDDEENEPLAKRRNRQFQQKGSPNDDCPAEIEDNVEREGATKITLATRNQLHVPHPWHLSSLSSTTLTGKLCIVYFVCPKFEEMLATVEQGQNKRPISMEPLQTVMPKKPRHHTLSPGKPSFSLGLTQLEKTPTPSLTPSIHPRLRNIEKGEHKDKQIRRWILNSSLDKEEPLAAFKGWEHLVETVTQVHNIESFKDGANPVYVGFGPRFGEANSKATCDNRLVIIDSMYSIVPGDDRDKLDAYVDILRTIRLELMLDIVCGPQNALVDQVLSLLEDKAEPVHRNQPRNKRKEVRSPFTAPSTRTLTRRAEGLPTAKKFNTVGEEENTRKKITQQSHGFADFLPLFFLGQSECEDYRLSIPLTLGLKSELLMDCNKEEALRAKVLAEQKMQNRDFPEQKLYGNEMNWYKILQIEVTADEATIKKQYRKFALQLHPDKNKYAGAEAAFKLIGEAQRILLDREKRSELDRKFRVVMHGPSMAPHHQQKFQMNYNSVTQNTVRPNFTTFNPWQQQQQPSQTSQQGINGDRATFWTACSFCSVRYEYYREVLNRSLRCQHCNKPFIAYDVDVQGTTPATNLSQQTFTQRTYGLNHGAVKVDFGAQANLHTKKSDTESRANKGSTSDVSKKPNGKRSRKQMVESSESSDSFSSDSDDMFANDDGFTDLEKNSASREEHPRRSTRQKHQVSYNENASDDDDDESFEPSRINTGNESSNPANEMNIQNGLASALKDNKKGVKRDSEEDLVNRNAKIKEVRGEEVVGDSKVDEASENDVYPDPEFSDFDKDKKEESFAAGQIWAIYDMADGMPRFYALIKKVMSPGFKLRITWLEPDPDDDDEISWSIQELPIACGKYKLGSSDIIEGHETFSHMITCEKVGRSSFNVYPRKGETWALFKNWDIKWHKDAESHRKFDFEFVEILSNYVEGDGVFVALLGKLKGFVSLFFPILKDGNPLFQIPSTQLFRFSHRVPSFRMTGQEGVGVPMGSLELDPVSLPTNLDEIELPGELIGKTSQSPSVGMSSRSSDALKFMMKSDTHASTSKINLEGQNSTLRTKAPVDHIANGSAPSASVAAAIQVPKQQFFNFDEERSKVGVGQVWASYGGQDGAPRYCC 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00376 1184 MobiDBLite consensus disorder prediction 740 766 - -
Aip04g00376 1184 Pfam DnaJ domain 483 544 IPR001623 -
Aip04g00376 1184 PRINTS DnaJ domain signature 503 518 IPR001623 -
Aip04g00376 1184 PRINTS DnaJ domain signature 519 539 IPR001623 -
Aip04g00376 1184 PRINTS DnaJ domain signature 485 503 IPR001623 -
Aip04g00376 1184 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 449 472 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 1 107 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 701 715 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 358 374 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 358 379 - -
Aip04g00376 1184 Pfam Domain of unknown function (DUF3444) 848 1051 IPR024593 -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 780 794 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 1 24 - -
Aip04g00376 1184 PANTHER - 449 472 - -
Aip04g00376 1184 PANTHER - 474 1182 - -
Aip04g00376 1184 Gene3D DnaJ domain 480 599 IPR036869 -
Aip04g00376 1184 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 474 1182 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 831 860 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 47 61 - -
Aip04g00376 1184 SMART dnaj_3 482 539 IPR001623 -
Aip04g00376 1184 SUPERFAMILY Chaperone J-domain 479 547 IPR036869 -
Aip04g00376 1184 CDD DnaJ 483 536 IPR001623 -
Aip04g00376 1184 ProSiteProfiles dnaJ domain profile. 483 547 IPR001623 -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 682 794 - -
Aip04g00376 1184 MobiDBLite consensus disorder prediction 716 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00376 Aip-Chr4 4495608 4505399 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00376 441 643 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.279 3.98e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00376 - - ahf:112795786 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00376 04 4495608 4505399 Aip04g00376 04 4495608 4505399 ECH