Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00362 ATGGGGTGTGTGTTTGGGAGACAGTCATCACAAAAGTCCGGTGCGGCGGCAGAAGGGGAAGCGGCGGCGGAGAGGAGAGAGAGGAGAGAGGAAGTGAGGGAAGCAAAAGCAGAAGTGGTTGTTGAGACTCAGAATGGTGGTGGTGGTGGTGGAGAAGAGAAGAGGAGTTCAAGGCAAAGAGGTGAGAGGAGAAGATCTTCAAAACCAAATCCAAGACTGAGTAATCCACCAAACAATGTTCATGGTGAGCAGGTGGCAGCAGGGTGGCCCTCTTGGCTTTCCAAGGTTGCTGGTGAAGCCATCAATGGATTGACCCCTAGGAGAGCTGACACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAGGCTAGGGATACTTTAACCGGAAAAATTGTTGCCCTAAAGAAAGTCCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTCATGGCCAGGGAGATTCTGATCCTGCGTCGCCTGGATCATCCCAATGTCGTCAAATTGGAAGGTCTAGTGACTTCTAGAATGTCATGTAGCTTATATCTTGTCTTCGAATACATGGTGCATGATTTGGCTGGACTCGCTACAAATCCAGCGATTAAGTTCACAGAGCCTCAGGTTAAATGTTACATGCAGCAACTATTTTCGGGGCTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGATCAAACCTTCTTATTGACAATGATGGAGTTCTTAAAATTGCTGATTTTGGATTAGCATCGTTCTTTGATCCTCATCACAAGCATCCTATGACCAGTAGAGTGGTGACTTTATGGTATCGTCCTCCCGAACTTCTTCTCGGGGCCACCGAATATGGTGTCGGAGTGGACCTTTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCCGGAAAGCCAATTATGCCTGGTCGAACAGAGGTGGAACAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCAAAGTTGCCACATGCAACAATTTTTAAACCCCAACAATCGTACAAGCGGTGCATAGCAGATACTTTTAAAGATTTTCCGCCGTCATCCCTTCCACTTATTGAGACCCTTCTTGCAATCGATCCAGCAGAGCGTCTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCTTATGCTTGTGATCCCTCAAGTCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAACTACGTGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGCTGATGGTGTCAAGAAATCCCGACCACGCGATAGAATTGGCAGGGGAATTCCAGTTCCAGAGGCTAATGCTGAATTGCAAGCAAATATTGATAGACGGCGACAGATAACACATGCGAACGCGAAGAGCAAGAGTGAGAAGTTCCCGCCTCCCCACCAAGATGGAACTCTAGGCTATCCATTGGGTTCTTCGCATCACATGGATCCGGTATTTGATCCTCCCGACGTTCCGTTTAGTTCCACGAACTTCTCACAACCGAAATCAAGCATGCAAACGTGGTCTGGCCCCTTGGTAGAATCTGCCGGCGGTGGTGCACCGAGAAGAAAGAAAAAACACGGTAGGTGA 1653 0.4676 MGCVFGRQSSQKSGAAAEGEAAAERRERREEVREAKAEVVVETQNGGGGGGEEKRSSRQRGERRRSSKPNPRLSNPPNNVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTEPQVKCYMQQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPHHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIADTFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRDRIGRGIPVPEANAELQANIDRRRQITHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKSSMQTWSGPLVESAGGGAPRRKKKHGR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00362 550 MobiDBLite consensus disorder prediction 430 451 - -
Aip04g00362 550 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Aip04g00362 550 Gene3D Phosphorylase Kinase; domain 1 100 194 - -
Aip04g00362 550 SUPERFAMILY Protein kinase-like (PK-like) 107 402 IPR011009 -
Aip04g00362 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Aip04g00362 550 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00362 550 MobiDBLite consensus disorder prediction 1 15 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 513 532 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 53 69 - -
Aip04g00362 550 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
Aip04g00362 550 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00362 550 CDD STKc_CDK9_like 112 396 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 430 550 - -
Aip04g00362 550 PANTHER CELL DIVISION PROTEIN KINASE 62 549 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 1 84 - -
Aip04g00362 550 PANTHER CYCLIN-DEPENDENT KINASE 62 549 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 463 485 - -
Aip04g00362 550 MobiDBLite consensus disorder prediction 19 38 - -
Aip04g00362 550 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00362 Aip-Chr4 4354521 4358292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00362 107 434 Core Cell Cycle Gene Families AT5G10270 51.744 2.37e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aip04g00362 Pkinase 1.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00362 K08819 - gmx:100779413 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00362 04 4354521 4358292 Aip04g00362 04 4354521 4358292 ECH