Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00345 ATGGCGGGAGAAGGAGGCGATGTTAGCGTTGCTAACGGCGCTGATGAAACAGCAAACCCGGAATCCGCAGCCTCCTCTCCAAAGAGCAAGGTCAAGTTCATGTGCAGCCATGGTGGCAAGGTTCTTCCCCGTCCCTCCGATGGCCTCCTCAAGTACGTCGGCGGCGAGACTCGCGTCGTTTCTGTCCCTAGGAACGTCACTTTCTACGAGTTGATGAAGAAGCTGCATGGAATGATCGAAGGAGGAGAAAGCATGGTGCTAAAGTATCAGCTGGTGCCGGAAGATCTGGACACACTGGTATCGGTGAGGAACGACGAGGATCTAAAGCATATGATTGACGAGCATGACCGTCACGAAGTTGGAGGAGCTCCCATGCTGCGGACATTCATGTGCCCGTTGAAGCCGCTTTTGGTGGTGGACAAAGATAACCAAGGAACATCAGGGACTGAGCCCTACCCCTTGGAGCAGCGCTACATTGATGCCATTAACGGCTTCCAGCGCATAAGCCCAAGGTCAAGGCCTAGTCCAATTAGGGCTGCATTCAACGCCCCCTCTGCCTGTTCATCCCCCAAATCCAACTCCCCAGACGGTCACACTACGGATCTGGTCCACGAATCGCCGCCCTTCCACGGCCACATTCTCGGTCTAGGCCGCCGTAGCACCATGCATAGAGTGCACAGCTCTCCCAGCATTTCTAGCCTAAGCAACCTTCACAGCCTTGCCTTTCAACAGCACGAACACCATAACCATTATCACAATCATTCTCCGAGCCACCAGAGCCCGTGCCAGAGTCAGAACCAGGGCCAGAGCCAGGGTCAGGGCCAGGGCCAGAACCAAGGTCACCATCCTCCTGCTCATCTGCCTGCTTCTTATCAAAGAACCGGGCCACAAGATCAATTAGTTGGGATGGGAAGGCCGCCGCCGCTTTTGGCGCTGAGGAGGTCGGATATGGGTAGCCGGAGTGCAAATAGTAGTAGTAGTACTTTCAACTATTATTATCCGGCTACTAATAATAATAATTGCAGACCCCCAAAAGGGTACGGATACTACGATGAATCTCCAGCATACGGTGGTGGCATGGGTGAAAGAGTTGGTAGTGTGCCTCAGAGTCCTAGAAACTCTATTTGGGAATAA 1134 0.5335 MAGEGGDVSVANGADETANPESAASSPKSKVKFMCSHGGKVLPRPSDGLLKYVGGETRVVSVPRNVTFYELMKKLHGMIEGGESMVLKYQLVPEDLDTLVSVRNDEDLKHMIDEHDRHEVGGAPMLRTFMCPLKPLLVVDKDNQGTSGTEPYPLEQRYIDAINGFQRISPRSRPSPIRAAFNAPSACSSPKSNSPDGHTTDLVHESPPFHGHILGLGRRSTMHRVHSSPSISSLSNLHSLAFQQHEHHNHYHNHSPSHQSPCQSQNQGQSQGQGQGQNQGHHPPAHLPASYQRTGPQDQLVGMGRPPPLLALRRSDMGSRSANSSSSTFNYYYPATNNNNCRPPKGYGYYDESPAYGGGMGERVGSVPQSPRNSIWE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00345 377 MobiDBLite consensus disorder prediction 1 30 - -
Aip04g00345 377 MobiDBLite consensus disorder prediction 355 377 - -
Aip04g00345 377 PANTHER OS05G0427100 PROTEIN-RELATED 11 284 - -
Aip04g00345 377 Pfam PB1 domain 50 118 IPR000270 GO:0005515
Aip04g00345 377 MobiDBLite consensus disorder prediction 246 331 - -
Aip04g00345 377 MobiDBLite consensus disorder prediction 167 215 - -
Aip04g00345 377 PANTHER OS05G0427100 PROTEIN 11 284 - -
Aip04g00345 377 SMART PB1_new 45 133 IPR000270 GO:0005515
Aip04g00345 377 Gene3D - 51 131 - -
Aip04g00345 377 MobiDBLite consensus disorder prediction 185 200 - -
Aip04g00345 377 MobiDBLite consensus disorder prediction 317 331 - -
Aip04g00345 377 CDD PB1_UP2 34 129 - -
Aip04g00345 377 MobiDBLite consensus disorder prediction 255 280 - -
Aip04g00345 377 SUPERFAMILY CAD & PB1 domains 47 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00345 Aip-Chr4 4232318 4233534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00345 30 165 MAP Kinase Kinase Kinase AT5G57610 45.390 2.78e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00345 - - aip:107638505 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00345 04 4232318 4233534 Aip04g00345 04 4232318 4233534 ECH