Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00325 ATGGAAGTATCAGATTTGCAAAACAAGAAGAAGAAGCAGCAGAGCGGCAACAACAACAATAACAGCAGCCTTGTGGTCCCCTTTGATGGCGCCACCACCGCCACCGGAAGGCCCTTCATCATGGGGGGGTCCATCTCTTCTTCATCTTCGTCGTCTTCTTCTTCCTCCAATTCAACTTCTTCTTCCACCACCATCGACGCCAACCTGGCCATCGCCACCAGATCTGACGACAACCAGCTCCAGACTGCACCCAAGAGGTCCACCAAGGACAGGCATACGAAGGTCGACGGTCGAGGCCGCAGAATCCGAATGCCCGCCACATGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTGGGACACAAGTCAGACGGAGAGACCATCGAGTGGCTTCTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGCACCGGCACCATCCCCGCTAATTTCTCCACCCTCAACGTCTCTCTAAGAAGCAGCGGCTCCACGCTCTCCGCTCCGCCGTCCAAGTCCGCACCTCACACTTTCCACGCTGCAGCGTTGGCACTCGCTCACCACCATCCTTCTTACGAGGAAGCGTTTCACCCGCACACGGCGTTGCTAGGGTTTCACCCTCACCACGCGCAGCACCAGCACCTTATGACTGCTGACCAAATCGCAGAAGCGCTTCCCGGCGGCGCCGCCGACTCCAGCGAGAACTATATGAGGAAACGCTTCAGAGAAGACCTGTTCAAAGATGAGAGCAATCATCAGTCGGAGTCGCAGAACAATGAAAGTGGTGGTACAGGTGCAGTTGCTGCCGATGGTTCTTCGCCAAAGCCGTTCAAAACCAACCTACAAATGCAGCTGCAACAACAGCAACCTCAACCAGAAGGAGGAGGAGCGGGTGGTGGTGGTGGTTCTTCTGGACATGGACTTCTTCGCCAATCCAATTTGGTACCTGCCACTGCCATGTGGGCGGTAGCGCCGGCACCCGCCACCGCCGGTGCACCAGGCAGCACAATCTGGATGCTTCCAGTGACTGCTGGAGGTGCAGGTGGTGTAGCCACCGGTGCTGCAGCCTCGGAGGCGCAGATGTGGCCGTTTGCTCATCAGGGAGGTAGTGGCGGTGGCGGTGGCGGTGGTAACAACACGTTGCAAGGTCCACTACACTTGATGCCGAGGTTCAACCTTTCCCCCAGTGGCGGCGTTGAATTCCAGCAAGAGGGACGCGGTGGTCTTCAGTTGGGTTCGATGGTAATGCCGGCGGCGCAGCAACAGCAGCAGCCGCCGTCTCAGCATCTTGGATTGACGATGTCAGAATCCAACTTGGGAATGCTGGCTGCTTTGAATGCTTACACAAGAGCTGGCTGCAGACAGCGGGGAAGATGGTCCTAA 1383 0.5741 MEVSDLQNKKKKQQSGNNNNNSSLVVPFDGATTATGRPFIMGGSISSSSSSSSSSSNSTSSSTTIDANLAIATRSDDNQLQTAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAFHPHTALLGFHPHHAQHQHLMTADQIAEALPGGAADSSENYMRKRFREDLFKDESNHQSESQNNESGGTGAVAADGSSPKPFKTNLQMQLQQQQPQPEGGGAGGGGGSSGHGLLRQSNLVPATAMWAVAPAPATAGAPGSTIWMLPVTAGGAGGVATGAAASEAQMWPFAHQGGSGGGGGGGNNTLQGPLHLMPRFNLSPSGGVEFQQEGRGGLQLGSMVMPAAQQQQQPPSQHLGLTMSESNLGMLAALNAYTRAGCRQRGRWS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00325 460 MobiDBLite consensus disorder prediction 83 101 - -
Aip04g00325 460 PANTHER TRANSCRIPTION FACTOR TCP8 15 453 - -
Aip04g00325 460 MobiDBLite consensus disorder prediction 249 309 - -
Aip04g00325 460 Pfam TCP family transcription factor 87 209 IPR017887 -
Aip04g00325 460 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 453 IPR005333 GO:0003700
Aip04g00325 460 MobiDBLite consensus disorder prediction 1 101 - -
Aip04g00325 460 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Aip04g00325 460 MobiDBLite consensus disorder prediction 10 29 - -
Aip04g00325 460 MobiDBLite consensus disorder prediction 39 82 - -
Aip04g00325 460 MobiDBLite consensus disorder prediction 275 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00325 Aip-Chr4 4098420 4099894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00325 85 364 TCP Transcription Factor Family AT1G35560 47.902 6.76e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip04g00325 TCP 3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00325 - - adu:107482753 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00325 04 4098420 4099894 Aip04g00325 04 4098420 4099894 ECH