Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00324 ATGGAAGATGAAAACATGGGAGAAGGAGAAGAGAAGTTTGAGTATGAAGAGGTTGTGAAAGCAACGGAGAACTTCAACCCTAAAAGGATGATAGGCAAAGGAAGCCATGGAATCGTGTACAAAGGTCTACTACCACGGACGGTGGCTGTGAAGAAAGCATCATCGCTAGATTCTCTCCACCATGATGATAACTCCAACAAGCTCCAAAACGAGATTCGAGTGCTGTCAATTCTACGTCAAAGCCCTCACGTGCTTAACCTTTTAGGCACGAGCCACGATTCGTTCGGGAACAAGGTCATGGTGATGGAGCTCTTGCCAAATGGCTCCCTCCACGACTGGCTTCACGGTTCGAGAAAACCGCCGCCGTCGTGGACGAAGCGCGTGGAAATCGCCATGCAGATCGCCCGCGCGGTTCAGTTTCTCCACGAAGGGAAGCCTATGGTGATCCACAGGGACATCAAGTCCACCAACATCTTATTCGATTCTCACATGAACGCCAAGTTGGCGGACTTTGGACTGGCGGTTATGGTTGGATCCGTGGTTGAGTCACCACCGAGTCAACCCGCTGGGACAATAGGGTACATAGACCCGAGTTACACGAGTTCAGCAAAACTGAGTCCCAAGAACGACATCTTCAGCTTGGGGGTTGTGTTGTTGGAGATCATAAGCGGGAGAAAGGCCATTGACGTGTCGAAAACGCCGGCGTCGATCGTGGAATGGGCGGTTCCGTTGATTGAGAGGGAGGTTGTGGAAGAGATTTGTGACGGGAGGGTGGCGGTGCCGGCGTACATGGCAGGTGGAGTGGGTGAGATTGTGCGGTTGGGTGGACGGTGCGTGTCGGAGAAGGAAGAGGATCGTCCGTGTGCTCGGGAGGTGGTTATGAGAATAACGGACGTAGCGGAGCGTGTGAGGTACCCGTTTTGGAGAAGCGTGTTAATGAGGAGCATCGCCGGCATGGTGGGATTCACGAGAAATAAGAGGAGCAAGTTGTTGCTCAATACTTCTTCTCACAACACGTCTTCCGTCATCACCGTTAAGCAAGTTTTATCGCTCTGGGATTGA 1062 0.5207 MEDENMGEGEEKFEYEEVVKATENFNPKRMIGKGSHGIVYKGLLPRTVAVKKASSLDSLHHDDNSNKLQNEIRVLSILRQSPHVLNLLGTSHDSFGNKVMVMELLPNGSLHDWLHGSRKPPPSWTKRVEIAMQIARAVQFLHEGKPMVIHRDIKSTNILFDSHMNAKLADFGLAVMVGSVVESPPSQPAGTIGYIDPSYTSSAKLSPKNDIFSLGVVLLEIISGRKAIDVSKTPASIVEWAVPLIEREVVEEICDGRVAVPAYMAGGVGEIVRLGGRCVSEKEEDRPCAREVVMRITDVAERVRYPFWRSVLMRSIAGMVGFTRNKRSKLLLNTSSHNTSSVITVKQVLSLWD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00324 353 Gene3D Phosphorylase Kinase; domain 1 10 104 - -
Aip04g00324 353 SUPERFAMILY Protein kinase-like (PK-like) 11 316 IPR011009 -
Aip04g00324 353 ProSiteProfiles Protein kinase domain profile. 25 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00324 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Aip04g00324 353 Pfam Protein kinase domain 27 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00324 353 PANTHER OS01G0750732 PROTEIN 11 318 - -
Aip04g00324 353 PANTHER - 11 318 - -
Aip04g00324 353 Gene3D Transferase(Phosphotransferase) domain 1 105 306 - -
Aip04g00324 353 SMART serkin_6 25 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00324 353 ProSitePatterns Protein kinases ATP-binding region signature. 31 52 IPR017441 GO:0005524
Aip04g00324 353 PIRSF ILK 3 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00324 Aip-Chr4 4078698 4079890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00324 13 287 Receptor kinase-like Gene Family AT3G59420 43.617 2.46e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip04g00324 Pkinase 6.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00324 - - lang:109334080 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00324 04 4078698 4079890 Aip04g00324 04 4078698 4079890 ECH