Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00322 ATGGCCAACATTTTGGCTTTGATAATATTCTTCATCACTATATTCATCTCCTTCTCCCTCTCTTATGGATACGACCCGTTGGATCCTTCTGGCAACATCACCATCACATGGGATTTCATAAGTGATAATGGGGCTACGGTTGATGTGAAGGTGTCAATATACAATCTGCAACTGTTCCGGCACGTGGAGGCGCCGGGATGGAGATTGGGATGGGCATGGAAAGGAGACGAGGTGATTTGGGCGATGTGGGGAGCAGAGGCAATGGAGCAAGGTAACTGCTCCAGGTTCAAAGGCCAAGACAAACCACACTGTTGCCTCAAGCATCCTCTCATCATTGATCTTCCCCCAAACGCTCCTTACAACCACCGCTTCTTCAACTGCTGCCGGGGTGGTCTCCTCTCTTCCCTCACTCAAGACATCACCAAGTCCGCCGCCTCCTTCCAAATGAACTACAACAAGCCATCTCTAGATGCAACTACCGCTTCTTTCACCATGCCGGAGAATTTCACCCTCGCCGTCCCCGGTTACACCTGCAGTGCACCCTTTCAGGTCCCCCCTACAAAGTTCACCGCCGATGGACACCGATGGCAACAAGTATTAGACACGTGGAATGTGACGTGTATGTACTCGCAGTATCGAGCATCGCCTGCACCGAAATGCTGCGTCTCCTTATCTGCATTCTATAACAGCACCATCGTTCCCTGCCCCGTTTGCAGCTGCAATTGCAAAGGCCTACCAGGAGCACATTGTATCGATTCTTCATCATCGGTGTTGCAACTGCCACAAGAAGAGTCATCGGAAGTGGTGAGGTGTTCGCGTCACATGTGCCCAATTCGAATCCACTGGCACGTCAAACAGAGTTACAAAGAGTATTGGCGCGTAAAGATCACCATCACAAATCTCAACTTGGTCAAGAACTACTCACAGTGGAACATCGTTGTGCTACACCCTAACTTGCGAAGTGTGACTCAAGTTTTCAGCTTCAACTACAAGGCCCTCCCTATTTACGGCAATATCAGGATGTTTTGGGGGCTGGAGTACTACAATGACATGTTGCTGTCAGGGAAGGATGGAAATGTGCAAACAGAGATGTTGCTTCACAAAGACACAGAGGAGTTCACATTCAGAGAAGGATGGACATTTCCGAGAAAAGTTTCATTCAATGGGGAGGAATGTGTCATGCCATCTCCTGATAACTATCCAAGCCTCCCTAACAATGCACATCTTCTCACTTTCTCCTCCTTCTTACTTACTGCCCTCTATTTTCTTCTCTACATTATATTCTTCTAG 1290 0.4829 MANILALIIFFITIFISFSLSYGYDPLDPSGNITITWDFISDNGATVDVKVSIYNLQLFRHVEAPGWRLGWAWKGDEVIWAMWGAEAMEQGNCSRFKGQDKPHCCLKHPLIIDLPPNAPYNHRFFNCCRGGLLSSLTQDITKSAASFQMNYNKPSLDATTASFTMPENFTLAVPGYTCSAPFQVPPTKFTADGHRWQQVLDTWNVTCMYSQYRASPAPKCCVSLSAFYNSTIVPCPVCSCNCKGLPGAHCIDSSSSVLQLPQEESSEVVRCSRHMCPIRIHWHVKQSYKEYWRVKITITNLNLVKNYSQWNIVVLHPNLRSVTQVFSFNYKALPIYGNIRMFWGLEYYNDMLLSGKDGNVQTEMLLHKDTEEFTFREGWTFPRKVSFNGEECVMPSPDNYPSLPNNAHLLTFSSFLLTALYFLLYIIFF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00322 429 PIRSF COBRA 1 429 IPR006918 GO:0010215|GO:0031225
Aip04g00322 429 PANTHER PROTEIN COBRA 10 423 IPR006918 GO:0010215|GO:0031225
Aip04g00322 429 Pfam COBRA-like protein 49 210 IPR006918 GO:0010215|GO:0031225
Aip04g00322 429 PANTHER COBRA-LIKE PROTEIN 6 10 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00322 Aip-Chr4 4070454 4073671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00322 1 404 COBRA Gene Family AT1G09790 54.106 2.06e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00322 - - lang:109329241 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00322 04 4070454 4073671 Aip04g00322 04 4070454 4073671 ECH