Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00321 ATGGCAAATTCAAAGGGCTCCTCGGGCATCAGAAATTTGATGTATTCTGGAAAGCATGCTCTGCTTCCTCCTAAAATCCCATTCCCTAGTGTTTCCCAAGCTTATGCTGATTATATGCCGAATCCTACCGTAGGTTCAAAGGTTGCGCAGAGACCAAGAGAGGGAAATGCTTTCCACCAACGGACATCATCTGAGAGCTTTATTATAGAGGAACAACCCTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTACGAAGGGGCAGTCATCGGCGTTCATCCAGTGATTCTTTTGCCTACCTGGAAAACACTAATGTTTCTAACATCGGTTATGCAGATAAGGATGAGTTTAAATTTAGGAATTTAGGACCTATTCCTTCTTGGTCACCTCAAGACTTAAATCACAGCAAAGATGTTCGTCATATGCCCATGTATGCAGAAATGAACTCAACTAAAATAAAAAATAGGGCATGGGACTCTTGTTTGAATCCTCCCACACATCCAGGTGGTGTTCCTGCTGTCAAAGAAAATGTTGCTTTTCAGAGTTCAGGACTGTCGTGCCCGCCACATGAAGCAGATGGGATTCCATCAACGGCCAATGAAAAGCATGATGTAGTAGAATCTGGTTCACAGGATGCAAAATTATCTTCAGAAAGAAAGGATGGTTCAAATGCAAAGTCATCTGCTACTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGAGTCCGTAAACTTCAATACATAGCTGAATTAGAAAGAAATGTACAAGGTTTACAGGCAGAAGGATCTGAAGTATCTGCCGAGCTTGAATTTCTTAACCAGCAGAATCTCATCCTGAGTATGGAGAACAAAGCTCTCAAGCAACGGTTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTCAACAGCAGCAGCCACAGCAACCCTCTGCCAGCCATCGGCGCACAAATAG 975 0.4287 MANSKGSSGIRNLMYSGKHALLPPKIPFPSVSQAYADYMPNPTVGSKVAQRPREGNAFHQRTSSESFIIEEQPSWLDDLLNEPETPVRRGSHRRSSSDSFAYLENTNVSNIGYADKDEFKFRNLGPIPSWSPQDLNHSKDVRHMPMYAEMNSTKIKNRAWDSCLNPPTHPGGVPAVKENVAFQSSGLSCPPHEADGIPSTANEKHDVVESGSQDAKLSSERKDGSNAKSSATETDSKRAKQQFAQRSRVRKLQYIAELERNVQGLQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYSTAAATATLCQPSAHK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00321 324 CDD bZIP_plant_RF2 237 283 IPR044759 GO:0003700|GO:0006355
Aip04g00321 324 MobiDBLite consensus disorder prediction 185 244 - -
Aip04g00321 324 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 310 IPR044797 -
Aip04g00321 324 Gene3D - 237 289 - -
Aip04g00321 324 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Aip04g00321 324 Coils Coil 248 303 - -
Aip04g00321 324 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Aip04g00321 324 PANTHER - 1 310 - -
Aip04g00321 324 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00321 Aip-Chr4 4067371 4068788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00321 20 307 bZIP Transcription Factor Family AT2G42380 30.464 4.03e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00321 - - gmx:100813098 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00321 04 4067371 4068788 Aip04g00321 04 4067371 4068788 ECH