Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00290 ATGGTCACATTTTTTAACTCCCTCACCTCCGCCACGGCCTCCGCCACGGACGATCCTCTCTTGCCATTCCTCTGGAGTGTCAAGAAAGCTCTAGAAGGTTCCGGCAGTTCCAGCCAGAACCTGTTGAACTTACTAGGAGATTGCATTAGAAGCTTCAAGGATAGCGAACAGTACCGAAACGACGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGTGTTAGTTCAGATTTTGAAAGTGTTTTCATGGAAATGCTGAACTGCAATGTGTGTACCAAAAATGCTTCACTCTATGTGTGGTCTGCATGTTTCTTTGAGTTGAAAGGGATGCTCCATGATGCCCTCACAATCTATCACCTTGGTATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCACAGGCATTATGTCACCAGAGAATATCTGAAACTTGGAAGGCTGCTGAAAGGCAGAAGATTGATTATAAGGGATCCACAGAGTTGGGAAACATTGGCATTAATCCATGGGATTCCTCCATTTTGGAAGACCTGATGAAGAAGATAAATCCTACAATTAAAAAATTTTATGGGTATCACTTGAGCACTAAATCGTATACAGGAAAAGTGGCCTTATCTACTTTGAAGAATGCATCAAGGAACAAAGTTATAGAGATAGGCGGGAGGAAGTACCATATCAAAGGTTGCGCTGGACAAGGTGGTTTTGCTCAAGTATACAAGGCTTGTGTCAACAGTGATCCAAATGATGTTGTTGCGCTAAAGATACAAAAGCCAGCTTTCCCTTGGGAATTTTACATGTATCGTCAGCTTGATATGCGGATCACTGGCAGAGAAAGGTCAAGCTATGGTTTGGCTCAGAGAATTCATCTGTATGCAGACTGTAGCATACTCATCTGTGACTATTTAGCTCATGGAACGCTACAGGATGTCATAAACACATATGCGGTCCAAGGGAAACCCATGGAAGAAGTTTTATGTATTTATTACACGATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGTAA 1089 0.4215 MVTFFNSLTSATASATDDPLLPFLWSVKKALEGSGSSSQNLLNLLGDCIRSFKDSEQYRNDVRFLKIWLLYMGVSSDFESVFMEMLNCNVCTKNASLYVWSACFFELKGMLHDALTIYHLGISRNAEPIEWLKKAQALCHQRISETWKAAERQKIDYKGSTELGNIGINPWDSSILEDLMKKINPTIKKFYGYHLSTKSYTGKVALSTLKNASRNKVIEIGGRKYHIKGCAGQGGFAQVYKACVNSDPNDVVALKIQKPAFPWEFYMYRQLDMRITGRERSSYGLAQRIHLYADCSILICDYLAHGTLQDVINTYAVQGKPMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYAR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00290 362 Gene3D - 4 158 - -
Aip04g00290 362 SMART mad3_bub1_i 4 122 IPR013212 -
Aip04g00290 362 ProSiteProfiles Protein kinase domain profile. 225 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00290 362 Gene3D Transferase(Phosphotransferase) domain 1 223 362 - -
Aip04g00290 362 ProSiteProfiles BUB1 N-terminal domain profile. 4 163 IPR013212 -
Aip04g00290 362 Pfam Mad3/BUB1 homology region 1 11 122 IPR013212 -
Aip04g00290 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Aip04g00290 362 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 6 151 IPR015661 GO:0007094
Aip04g00290 362 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 152 359 IPR015661 GO:0007094
Aip04g00290 362 Pfam Protein kinase domain 225 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00290 362 SUPERFAMILY Protein kinase-like (PK-like) 222 359 IPR011009 -
Aip04g00290 362 PANTHER BUB1 KINASE, ISOFORM A-RELATED 152 359 - -
Aip04g00290 362 PANTHER BUB1 KINASE, ISOFORM A-RELATED 6 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00290 Aip-Chr4 3689246 3692764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00290 219 358 MAP Kinase Kinase Kinase Kinase AT3G15220 28.169 5.27e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Aip04g00290 Pkinase 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00290 K02178 - gmx:100783171 538.11