Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00252 ATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACCAAAATGCAAAAATCACTTACTTGGTCTAAAAGAAAGAGAATAATCTTGGATGTGGCAATTGGGTTGGTCTATTTGCACTTTGGAGTTAAACCTGCAATCTACCACAGAGATATCAAAACCACCAATATACTGCTTGATGCAGGTATGACTGCAAGAGTTGCGGATTTTGGGTTAGCTAAACAAAATATTGAAAGTATATCTCTGATAAATACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAATTATCCGAAAAGAGTGATGTCTATAGTTCTAGTGTGGTTATATTGGAAATATTGTGTGGAATAAAAGCTCTTGATTTATCTTCATCTGGAGCACCTGCATTCGTTACCTCTGATTGGGTTTGGTCATTGCTGAAATCTGGTAACTTAGAATCAGCTTTGGATGCTTCTTTGTTAATAGATGAAAATTTTACTAGTAGAAAAATAATAGAAATATTCCTAATGGCTGGTGTTCTGTCTTCTCATGTAGTAGCTTATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTTCAGATAGGCCACTGGCTGTTGGGCACCATGTGTTTCCCAACATTATAATTAAAACATAA 687 0.3726 MVALKTISSLPWTTKMQKSLTWSKRKRIILDVAIGLVYLHFGVKPAIYHRDIKTTNILLDAGMTARVADFGLAKQNIESISLINTRVAGTHGYLAPEYALYGQLSEKSDVYSSSVVILEILCGIKALDLSSSGAPAFVTSDWVWSLLKSGNLESALDASLLIDENFTSRKIIEIFLMAGVLSSHVVAYSRPTILDALKMLEGDIEIPPISDRPLAVGHHVFPNIIIKT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00252 228 PANTHER OS01G0253100 PROTEIN 17 221 IPR045271 GO:0004714|GO:0006468
Aip04g00252 228 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 17 221 - -
Aip04g00252 228 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00252 228 SUPERFAMILY Protein kinase-like (PK-like) 18 200 IPR011009 -
Aip04g00252 228 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00252 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Aip04g00252 228 Gene3D Transferase(Phosphotransferase) domain 1 9 206 - -
Aip04g00252 228 Pfam Protein kinase domain 16 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00252 Aip-Chr4 3144847 3145533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00252 13 218 Receptor kinase-like Gene Family AT1G11050 67.143 1.39e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip04g00252 Pkinase 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00252 - - lja:Lj0g3v0288509.1 307.375