Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00251 ATGGTTATCGTTGCTTCAACTTCGATCTTCATTGGAAGAACACATAAAGCTAGTCTTCACCCAAGTTTCTCAGTTGATGCACTTGCCAATTTTACCCGTTTAGCTTCCTTCAATGCTTCAGGTTTTGTGCTTAATGGTTCTATTCCTGAGTGGTTTGGTGACAAAAGCAATAACAACTACCTTGGTGCACTCCAGGTGCTTGATTTAAGTTCTTGCTCAATAACTGGCTCTATTCCTGAGTCAATTGGTGGTTTGATTTTGTTGAAGTCTGTGTTACTTTCTGGGAATAGCTTAACTGGTAGAATGCCTTCAGGTTTGGGAATGTTGTCTAATTTATCTGTGCTTGATCTCTCAGGAAATGAACTTTCTGGGTCTATTCCTGATTCATTGTTTTCACTTGGGCTTGAAACTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTGAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCGAAGTTTTTCGGTTCAAATACTAGTTCTACTGATGCCACATTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTGTCTGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTAGTTTAGCTAGGAATTGCCTGGAGGATGTTCCAAATCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGAGAAGAGAAATTTACCCTTTCCATCAAATTCGACAATGGAAAAATCTTCCAGAAAGAAACTGATATTCATACTGGTAGGTGTATTTGGTGGACTTGGCTTTATTTTGCTTCTGGCATTGGTCCTCATACTGTTCTTAAAACTATGTGGCAATCATAAAAGCTTGGAAGTTCAAAGGGGAACCGAAAGTGGAGGGCCTGTTCCAGTAGGGGAGAGTCCTGTGCCGCCTAAAGACCTTGCATTCCACATTGCTGTCGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGAAAATGTCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAATGGAGCTACTGTTGTCATCAAAAAGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACCGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACGAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACATGATTGCAGCCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCAGCAAGCCATCATCTTCTAATCAACCAAATTTTGGCACATCATCAGTAACTTGGGCAGGTGATGTATATGGTTTTGCCATAATCACAGTGATTCTCACATTGCTTAGAACCTCCTCGATCAACGTCGAACTCTGTCTTCTCTTTCGCAGCTGCGTGTGCCTTGGCGGGGTCGACTGCTCTAGGTGCAGCGACGACAGCAGCGGGGCCGAAGGACACGATGAAGATAGTGGTAAAGAGAAGAAAAGGGAGGCTAAGGTTTCGTCGATGAAGAAAAGGAAGAGAATGGTGGTGGTAAACAGAAGGAAGCGACTGCAGTGGTCTGGAGGAGAGCATGCTAGAAGAGAAGAAGAATTGTTGTTGTTGAATTTGATTGTTGCTGTTGCTGAAGGAGAGAAGAAGAATTGGGATTTTTTGGATGGGAGAGGGAGAGGAAGGGAAAGTTCGCAAAGAGCAGAAGGAAGGAGATATCAAGATCCAAGGCCAGTGAGAAAACCCAGCTTCTTGAGTCTTGATCCAAGGCCATACCTACCTAGTAACATTAAACCCTTGAGAATCAAGATCCTGAATCACCTCCTCAATATCATCATCACTATTtgttccgagggttacctgaaactggaggtcgatctcggatga 2262 0.4142 MVIVASTSIFIGRTHKASLHPSFSVDALANFTRLASFNASGFVLNGSIPEWFGDKSNNNYLGALQVLDLSSCSITGSIPESIGGLILLKSVLLSGNSLTGRMPSGLGMLSNLSVLDLSGNELSGSIPDSLFSLGLETLDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPKFFGSNTSSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVSLARNCLEDVPNQRDVSVCRVFYEKRNLPFPSNSTMEKSSRKKLIFILVGVFGGLGFILLLALVLILFLKLCGNHKSLEVQRGTESGGPVPVGESPVPPKDLAFHIAVGESFTYEQILKLTGNFAEENVIKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDCSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFSKPSSSNQPNFGTSSVTWAGDVYGFAIITVILTLLRTSSINVELCLLFRSCVCLGGVDCSRCSDDSSGAEGHDEDSGKEKKREAKVSSMKKRKRMVVVNRRKRLQWSGGEHARREEELLLLNLIVAVAEGEKKNWDFLDGRGRGRESSQRAEGRRYQDPRPVRKPSFLSLDPRPYLPSNIKPLRIKILNHLLNIIITICSEGYLKLEVDLG 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00251 753 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Aip04g00251 753 Pfam Leucine Rich Repeat 64 85 IPR001611 GO:0005515
Aip04g00251 753 Gene3D Transferase(Phosphotransferase) domain 1 453 592 - -
Aip04g00251 753 SMART LRR_typ_2 157 180 IPR003591 -
Aip04g00251 753 SMART LRR_typ_2 134 156 IPR003591 -
Aip04g00251 753 SMART LRR_typ_2 181 204 IPR003591 -
Aip04g00251 753 SMART LRR_typ_2 61 85 IPR003591 -
Aip04g00251 753 SMART LRR_typ_2 109 133 IPR003591 -
Aip04g00251 753 SUPERFAMILY Protein kinase-like (PK-like) 357 578 IPR011009 -
Aip04g00251 753 SUPERFAMILY L domain-like 27 243 - -
Aip04g00251 753 ProSiteProfiles Leucine-rich repeat profile. 111 133 IPR001611 GO:0005515
Aip04g00251 753 MobiDBLite consensus disorder prediction 680 710 - -
Aip04g00251 753 MobiDBLite consensus disorder prediction 607 634 - -
Aip04g00251 753 ProSiteProfiles Protein kinase domain profile. 377 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00251 753 Gene3D Ribonuclease Inhibitor 135 283 IPR032675 -
Aip04g00251 753 Gene3D Phosphorylase Kinase; domain 1 354 452 - -
Aip04g00251 753 ProSiteProfiles cAMP/cGMP binding motif profile. 380 431 IPR000595 -
Aip04g00251 753 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 179 571 - -
Aip04g00251 753 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 19 124 - -
Aip04g00251 753 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 122 176 - -
Aip04g00251 753 Pfam Protein tyrosine and serine/threonine kinase 381 522 IPR001245 GO:0004672|GO:0006468
Aip04g00251 753 PANTHER RECEPTOR-LIKE PROTEIN 55 122 176 - -
Aip04g00251 753 MobiDBLite consensus disorder prediction 680 703 - -
Aip04g00251 753 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Aip04g00251 753 Gene3D Ribonuclease Inhibitor 14 134 IPR032675 -
Aip04g00251 753 PANTHER RECEPTOR-LIKE PROTEIN 55 179 571 - -
Aip04g00251 753 PANTHER RECEPTOR-LIKE PROTEIN 55 19 124 - -
Aip04g00251 753 MobiDBLite consensus disorder prediction 607 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00251 Aip-Chr4 3058366 3069520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00251 13 545 Miscellaneous Gene Families AT2G16250 43.569 2.73e-146 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Aip04g00251 PK_Tyr_Ser-Thr 1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00251 - - aip:107635843 982.63