Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00246 atgacgacgactagtcccgggaCTAGCTGCTTCTGCCGCCGGCGACAACGAGCTCAGGAAAGGCGTGCGAGCGAGACTGAGTGCGAGATGGTGACGAATGGCGACATGGAGAGCGACGAGAACCTTGAGTGCGAGACCAGCGACGAGAGAGGGAGAAAGCTTGAGATCGCGAGAGCTGATGAGCAGGGAGGATACCACATTGTCTCTAGACTTGCACTTAATATTGGTGTCAGTAAAGTTGTTTACCCTGTTTATCGAAATATAATTGCCCTTCTTTTGTTGAGTCTACTTGCTTATTTCTTAGAGAAGAACGAAAGACCACCCCTTGCTTTTTCTTTGCTGTTTCAGTTCTTCCTATTAGCATTGCTAGGCATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATATTATGCTTCTCCAACTTTAGCTTCTGCAATGCAGAACTCAGTTCCTGCAATCACTTTTGTCATGGCCTCAGCTCTAGGACTTGAGGAAGTCAACATTGCAAGAATAGACGGATTGGCAAAAATTCTAGGAACCATTGCAAGTGTTGGAGGTGCAACTGTGATCACTCTATACAAAGGTCCTCCTCTTCTCCACCTGCAGACACCTCAGATGCAAGAAGATAGCTACATACATCAGTCATCAATCAAAGTTCAGAACTGGACATGGAGTTGCGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTATCACTCACTTCCTTTACATTCTTCTTTGGATTAGTTCAGTTCTTGATTATAGAAGCCTTTTTAGAAACTCATATGGAACGTTGGAAGATAATATCAACAGAAGAGCTTCTTACCATCCTATATGCTGGAATTGTATCGTCTGAGGTTGTCATATCTCTGCAAACATGGTGTATTCAAAAGGGTGGCGCTGTATGTGTTGCTGTCTTTCAGCCATTGCAAACCTTTTTAGTTGCTATAATTGCAGCCCTCATTCTTGGTGATCAGTTATACTCTGGAGGGATTGTCGGCGCAATAAGCCTTGCTCAACGATGA 1026 0.4308 MTTTSPGTSCFCRRRQRAQERRASETECEMVTNGDMESDENLECETSDERGRKLEIARADEQGGYHIVSRLALNIGVSKVVYPVYRNIIALLLLSLLAYFLEKNERPPLAFSLLFQFFLLALLGITANQGFYLLGLYYASPTLASAMQNSVPAITFVMASALGLEEVNIARIDGLAKILGTIASVGGATVITLYKGPPLLHLQTPQMQEDSYIHQSSIKVQNWTWSCAPVVKKYPAKLSLTSFTFFFGLVQFLIIEAFLETHMERWKIISTEELLTILYAGIVSSEVVISLQTWCIQKGGAVCVAVFQPLQTFLVAIIAALILGDQLYSGGIVGAISLAQR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00246 341 PANTHER WAT1-RELATED PROTEIN 64 336 - -
Aip04g00246 341 PANTHER WAT1-RELATED PROTEIN 64 336 IPR030184 GO:0016021|GO:0022857
Aip04g00246 341 Pfam EamA-like transporter family 232 336 IPR000620 GO:0016020|GO:0016021
Aip04g00246 341 Pfam EamA-like transporter family 78 190 IPR000620 GO:0016020|GO:0016021
Aip04g00246 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Aip04g00246 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 85 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00246 Aip-Chr4 2973556 2976379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00246 64 336 Nodulin-like Gene Family AT3G18200 63.542 1.16e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00246 - - adu:107481576 437.187