Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00211 ATGAGAGAGTCAATAGTCAATACAACTCTGAAGGCCTCAAGGGGTTTTCTTTCAGTTTTGCACTGCACTGCATTATGCAATGCCACTCGGCAATGGCGACGACTTCGTTTAACACTCGTTGCCCTTACTAGTCACTTTCACTTTTCCTCCTCCCTTTGCGAAGATCAAAGAAGAACTCAAACTCAAGGAAATGAGAATCATGGAGTTCATGTATGTAACAAATGTGGATGGCCTTTTCCAAATCCACACCCCAGTGCCAAACATAGGCGTGCTCACAAGAAAAACTGTGGAACCATTGAAGGTTACAAGCTTTTGGTCTCAGAGGGTCAAACCCATTTGAACCTTTCAGATGATGAACACTTCTCTGATAATGATCACAAAACACAAGCTGCAGAAGAGAGTCCATCAATTTCCAAATCAAGAAATGATATTGTAGCACAAACTCCTAAAATTTTGCAAAGTGAGAGGAATGATGATTGTAACCTGCTGGAGTTACAAGATTTGAAAACTGATGATTCTTTTGCTCTCGCAAGTGACTCAAATACCTGCAGATCTGAAGCCATGTCTGATGTGTTGCTGGACAATAAGATCTATGTTGATGGAACGAAGGGGACGACTTTGAAAGAAAAGGATGAAATCAAACCAGATAGAGACATGTTTGAGATTGTGGAATCTTCCGACAGCACCATAGGTAGAACATTTGAGGGAGTGTCTGGAGCAGTTACTGAAGTGGTTAGCTTGAAATCTCAAGTTACTGATGGAGCTTTTATTCTGAAGGAAAATAATGGCTCTGGCTTCCCTTCTGTTATGCCCAAAGATCTTTTTCTTGAAGCAGAATCTGCTCAGAGCATGAATGATTCCATAGATGGCATACGGGTAGAGTCAGAACACATGACAGAGCTTGCTACTTCTGGTGACATCATGATATCACGGGAAAGGGAAGAAGTAAATGTTGAAATGCTTACATTTCCTTCATGTGATGATAGACCTGATGTGGCACACCCTCATATTGAGTATGAATGTCATGAACCAGTGGTCTCTCAAAATTCTGCAAGTCTACATTTGTCTAAAGCATTGGAACAAGGGCATGATGGCTTGAAGGATTCTGTTAATAAGGAAAATGATTTTCTTATCAACCAAGGCCAACTGAGCAAAAAGGGAGATCTTCTCTCGCAAGATATGCATTCATTGAATAGTAACATGAAAAAGCAGGTGAACTGTGAGCTTGTGGCTGCAGAAATGCATGCTGAAGAGTGCATTGAGGTTTTCAATGGTGAAAGTAACAGAAGATTACATGAAACTGGAGCCTTTATGAATGATATGAAAACTGAGAAGAATGAGAATCATGTGGTTCACTTTTCTGAAGAACAGGTATCCAATGATGCTCATAAAAATTCACAACAGATTGATGTACCCAAAGGTAGTTTAATGGCTGCATCAGATGAGAACGCCTGTGATGCATCCTTTGTATCTGCAACTAGTCAAACAACTGCTGTAATTATCAGAGACAATACAACTCATCATGAGGGAAACATAACCAGCATAGCTGTAGATGACGAATGCAGAAGGGCTAATATTGAAAATGATACTGGAATATGCATGAATACTCTTCAATCTAGTAATGTGCTTTCGGAGATCAATTCATCAAGTATATGTAATGAATATGGTGTTGAAATGGGTAAATTTGAGCAATCTGATATAGTAGATGCACAACATGCTGAAAGTGGTATTGTGAAAGATGCTACATTACCAGATATTTTTGAATCTACAATTCTTTCAGAGGTTGTAATAGATGGGCCTAAAGGGACACCTAAAGATATTGAATGCTCAAATAGAAGTCCATTATCTTGTACTCACGAAGAAATCAAAGAAGAGGAAATCAATAGCATAGACAGATCAAATGAATACAGTAATATAGTTGCTAGTACTTCTGCTGCTCCTCATCAAACACAAGACGAGGAACTATTACATAAGGCTACAGAAGGCATTGATTTAATTGAAGATTCCAATAGAACTGGTAGAGACCATTCTTTAAATATTGAGCCTTCTTATCAGTGTGTTTCTCCTGTCGAAGATACTCAAGTTGGACAGCATGGGACGAAAGTTCCTGGAGTTGTTGCTGTCCCTATTCAAGATCAAAGAGATCTCCCTGTGCAATCTGATGTACAAGCTACTAATGAAGCGGAAGCTATAGCATCAACTGATTTGTCGATGTCAACAGAGACAGAAAAATCCAACTTGAAGTACCCAGAGGCATCTGAGGAACAGCAGTATGAAAAATCCGAAATGTTTGAACCACCTTCTTTCATGACATTGGTCGAACCTGGACTCATGCTTGGCCCAAAATCTGCACCCGAAGTCGAGACAGATCCGAACAAGCAGAAACCGGATTCTAACTCTTCACAGGCTGCTTGGTTTCCCACTTTAACTCACATTGCCAATGAGTCTGAAGGGAGAAAGAGGAATGAAGAAATAATAGCCAAGGTAACAAGAAAGCAGAACACACCTCTCAAGAGTCTCTTGGTTGAGGCTGCTCATAACAGCAAAAAGTCAAAGTCGCCCATATCAGAAAAAGATTCCGTGAATCAGAAACGTGTTAGAGTCACAGAAGATAATGGTTCTGGATTGACTACTGTTAACTCCATTCTGGGTTGTGAATCTCCCGCAATGCAGATTATGAACCGAGAGAGTACGGAAGAATGGAACTCCCCGGCTGACATAACAAGAAAAAAGAAGAAAGACAAGAGCAGATCACACTGGATACAATTGTTGTGTTGTTCATCTGTCGAAACTCGGTGA 2799 0.4016 MRESIVNTTLKASRGFLSVLHCTALCNATRQWRRLRLTLVALTSHFHFSSSLCEDQRRTQTQGNENHGVHVCNKCGWPFPNPHPSAKHRRAHKKNCGTIEGYKLLVSEGQTHLNLSDDEHFSDNDHKTQAAEESPSISKSRNDIVAQTPKILQSERNDDCNLLELQDLKTDDSFALASDSNTCRSEAMSDVLLDNKIYVDGTKGTTLKEKDEIKPDRDMFEIVESSDSTIGRTFEGVSGAVTEVVSLKSQVTDGAFILKENNGSGFPSVMPKDLFLEAESAQSMNDSIDGIRVESEHMTELATSGDIMISREREEVNVEMLTFPSCDDRPDVAHPHIEYECHEPVVSQNSASLHLSKALEQGHDGLKDSVNKENDFLINQGQLSKKGDLLSQDMHSLNSNMKKQVNCELVAAEMHAEECIEVFNGESNRRLHETGAFMNDMKTEKNENHVVHFSEEQVSNDAHKNSQQIDVPKGSLMAASDENACDASFVSATSQTTAVIIRDNTTHHEGNITSIAVDDECRRANIENDTGICMNTLQSSNVLSEINSSSICNEYGVEMGKFEQSDIVDAQHAESGIVKDATLPDIFESTILSEVVIDGPKGTPKDIECSNRSPLSCTHEEIKEEEINSIDRSNEYSNIVASTSAAPHQTQDEELLHKATEGIDLIEDSNRTGRDHSLNIEPSYQCVSPVEDTQVGQHGTKVPGVVAVPIQDQRDLPVQSDVQATNEAEAIASTDLSMSTETEKSNLKYPEASEEQQYEKSEMFEPPSFMTLVEPGLMLGPKSAPEVETDPNKQKPDSNSSQAAWFPTLTHIANESEGRKRNEEIIAKVTRKQNTPLKSLLVEAAHNSKKSKSPISEKDSVNQKRVRVTEDNGSGLTTVNSILGCESPAMQIMNRESTEEWNSPADITRKKKKDKSRSHWIQLLCCSSVETR 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00211 932 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 133 929 - -
Aip04g00211 932 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 55 141 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 116 143 - -
Aip04g00211 932 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 133 929 - -
Aip04g00211 932 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 55 141 - -
Aip04g00211 932 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Aip04g00211 932 MobiDBLite consensus disorder prediction 116 132 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 850 866 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 778 803 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 730 746 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 895 916 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 730 756 - -
Aip04g00211 932 MobiDBLite consensus disorder prediction 845 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00211 Aip-Chr4 2410411 2414407 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip04g00211 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00211 - - aip:107638253 1755.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00211 04 2410411 2414407 Aip04g00211 04 2410411 2414407 ECH