Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00200 ATGGACCTGTACCCCGAAACCGCAACGAGCTCCTCTCCCACCTTCGCTTCCATCGGCCGCAGGAGCCTCAAGGACATGTCCATTTCCGAGCTCATTTCCGTTCTGCGCGCCGATTTTGACACCGTTGAAGAGGTTTTGTTGGCCAGAGACGCCAAACACAAAGCTGAGATCAGTCCACTTTATGAAAAGATCGAATTAGAGAGGCTAACGAGGCTTCGACTGGAATCGGAGCTGAAGACGAAGCAGGAGGAGCAGCGTTGTCACAAGTGTGAGAGAACACAAGAGGGTTACGAAATGTTGCTGAAGGAAGTGAAGAAGAGCGGGTTAAATGATTATAAGAACAATGCTATTATTGAAGAATTAAGGAACACGAATCGAGAGTTGGAGATTCAAAATAACAAAGCAACTGATGAATTGGCTACGATTAGGATCAGATGCAGTGAATTGGAGAATGCAAGGAATGTGAGTTTGGCTACCATTGAGAAGCTTAGGGTTGAGAATTGCAAATTGAGAAAGGAATTGAATAAAGGGGTTAATGTTGTAGTCAAAGATGAACAAGACAAGGAATTCAATGAAATGGATTTTTGCGGTTCTGCCTCTTTGCAAAGAATTAAAGACATTGGCCAAGGCCAATCTTCATCAGGTGGACTGTTCTTTAAAGTGTTGGATATGGATTCATGCAACAATGTGTCAGGGGATGCTGCATTTGAAGCTGTTGCTGAGGTTTACTCAGAGAGTGATAACGATGGACGTTTAGAACCAGTTCCTAGAATGGAGTTTGATTCCTTAGAAGCTGTTCAGACATTTTACAAGAGGTATGCCAGGCTAACTGGTTTTGGTTGGAAGATCAGGACCTCGAAAAAAGGGTTTGATGGGAGACCAAATTATGTGGTACTTGCATGCACTCGTGGGGATCGCCGTGTATCTAGTATTTTGACAACTCTTCCGACCCAATTCACAAAATGTTCTGCAAAGATCAATGTGAAGAAAGGGAAAGATGGAAAGTGGATGATTAGAAAGGTAGATCTTGATCACAACCACGACTTAAGCCCTTTAAATTTAAAATACTCAGGAAACACGACTATTAGCACACTCATTTAG 1101 0.4287 MDLYPETATSSSPTFASIGRRSLKDMSISELISVLRADFDTVEEVLLARDAKHKAEISPLYEKIELERLTRLRLESELKTKQEEQRCHKCERTQEGYEMLLKEVKKSGLNDYKNNAIIEELRNTNRELEIQNNKATDELATIRIRCSELENARNVSLATIEKLRVENCKLRKELNKGVNVVVKDEQDKEFNEMDFCGSASLQRIKDIGQGQSSSGGLFFKVLDMDSCNNVSGDAAFEAVAEVYSESDNDGRLEPVPRMEFDSLEAVQTFYKRYARLTGFGWKIRTSKKGFDGRPNYVVLACTRGDRRVSSILTTLPTQFTKCSAKINVKKGKDGKWMIRKVDLDHNHDLSPLNLKYSGNTTISTLI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00200 366 Coils Coil 64 84 - -
Aip04g00200 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 161 350 - -
Aip04g00200 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 161 350 - -
Aip04g00200 366 Pfam FAR1 DNA-binding domain 268 350 IPR004330 -
Aip04g00200 366 Coils Coil 114 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00200 Aip-Chr4 2254228 2257815 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g00200 FAR1 3.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00200 - - ahf:112795650 679.093