Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00187 ATGAGGGCTAGGATAGCTCTTAACATCAAATCAGTGAGCTATGAGTTCCTTGAGGAGACATTTCAACCTAAGAGTCAGCTCCTTCTTGATTCCAACCCTGTTTACAAGAAAGTCCCTGTTCTCATTAATCAAGACAAACCTATCTGCGAGTCCTTGATCATTGTGCAGTATGTGGATGATGTCTGGTCCTCTGGCCCATCCATTCTCCCTTCTGAGCCTTACGACCGTGCCATTGCACGCTTCTGGGCTACCTATCTCGATGACAAGTGGTACCCGACCTTGAGATCTGTTAGAGGAGCAAAAGGAGAGGACGAGAGGAAGAAGTTGATAAAGGAGGTCGGAGAAGGATTGACATTGCTTGAGGATGCACTTAACAAGATAAGCAGAGGCAAAGACTTCTTTGGTGGTGACCAAATTGGTTACTTGGACATTGCATTTGGGTGCTTCTTGGGATGGCTGAGGGTGACAGAGTCACTCACTGGGGTGAAGTTGCTTGACCAAGTTAAGACACCTTGTTTGGCGAAATGGGCTGAGAGGTTCTGTGCACATGGTGCTGTCAAAGATGTTATGCCACAAACAGAGAAGCTTGTTGAGTTTGCTAAGATGTTAATGGCCAAAATGGCTGCTTCTACTCCAAATTAA 642 0.4595 MRARIALNIKSVSYEFLEETFQPKSQLLLDSNPVYKKVPVLINQDKPICESLIIVQYVDDVWSSGPSILPSEPYDRAIARFWATYLDDKWYPTLRSVRGAKGEDERKKLIKEVGEGLTLLEDALNKISRGKDFFGGDQIGYLDIAFGCFLGWLRVTESLTGVKLLDQVKTPCLAKWAERFCAHGAVKDVMPQTEKLVEFAKMLMAKMAASTPN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00187 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 66 IPR004045 -
Aip04g00187 213 Gene3D Glutaredoxin 1 68 - -
Aip04g00187 213 CDD GST_N_Tau 1 62 - -
Aip04g00187 213 Gene3D - 69 212 - -
Aip04g00187 213 Pfam Glutathione S-transferase, C-terminal domain 81 182 IPR004046 -
Aip04g00187 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 72 199 IPR010987 -
Aip04g00187 213 Pfam Glutathione S-transferase, N-terminal domain 1 59 IPR004045 -
Aip04g00187 213 SFLD Main.3: Omega- and Tau-like 1 210 IPR045073 -
Aip04g00187 213 PANTHER GLUTATHIONE S-TRANSFERASE U17 1 202 - -
Aip04g00187 213 SUPERFAMILY Thioredoxin-like 1 64 IPR036249 -
Aip04g00187 213 CDD GST_C_Tau 73 201 IPR045074 GO:0004364|GO:0006749
Aip04g00187 213 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 202 IPR045073 -
Aip04g00187 213 SFLD Main (cytGST) 1 210 - -
Aip04g00187 213 SUPERFAMILY GST C-terminal domain-like 60 206 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00187 Aip-Chr4 2135625 2136846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00187 1 209 Glutathione S-transferase Gene Family AT1G10360 61.905 1.88e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00187 K00799 - aip:107635803 432.565