Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00183 ATGTTGGTTGTAGGTTTGGGACAATTATCAACTCCATATGGTGTGGAACAAGGTGGCTGGGCATATTCCTCAACCTTACTCATAGGGCTTGGAATCATGTGCACTTACACTTCCCACATCCTCGGCAAATGCCTTCGCAGATACCCAACGAAGCTAAGAAGCTACGCGGATATCGGCGGCCAAGCGTTCGGATCGAAAGGAAGGATACTAGTCTCTACCTTCATATACATGGAGATTTTCATGGCTCTCATCTCCTACACTATTTCGCTACACGACAATTTGATAACTGTTTTTTTAGGAACTACTTTGAAACTTAACCTGGCGAAGTTGTCAACTTCGCAACTACTAACTATTGTGGCTGTGTTCATTGCTCTCCCTACAATGTGGATAAGAGACCTTTCTTCCATTTCGTTTCTTTCCACCCTTGGGATTCTCATGTCCGTCGTCATTTTCGTGTCGTTGGCGGCTGCCGCCGTTTTTGGAGGTGTTCTGACTAATCATAGCATACCGGTTTTTCAGATGCATAATATTCCTTCAATTTCTGGGCTTTTTCTTTTCAGCTATGGAGGACACATTGTTTTCCCTAATATATATAAAGCTATGAAAGACCCTTCAAAGTTTACCAAGGTATCCATTGTGAGCTTCACAATTGTGACAGCACTATATATGATTATTGGGTTCCTAGGTGCAAAAATGTTTGGGCCTAATGTTAACTCTCAATTCACTCTAAGCATGCCACCAAAGCAAATCATTACAAAGATTGCTCTATGGGCTACAGTGTTAACCCCCATGACCAAATATGCACTTGAATTTGCACCTTTTGCAATTCACTTAGAGCATAGGCTTCCAAGTTCAATGAGTGGAAGGACAAAAATGGTAATTAGGGGTTGTGCTGGTTCAATCTTCCTTTTGATCATTCTTGCACTTGCTCTTTCAGTCCCATATTTTGAGCATGTACTTAGCCTCACTGGATCTCTAGTTAGTGCAGCAGTTTGTTTGATTTTGCCATCTTCTTTCTATCTCAAGATCTTTTGGGGTCAAATTGCAAAGCCCCTTTTGCTCCTAAACTTTTTCCTCATCATATTAGGGTTCTTTCTTGGGGTGATGGGTACTATTTCCTCATCAAGATCATTGGTGGAGAGTTTTCAAGCACATCATTCTAGTTGA 1167 0.4147 MLVVGLGQLSTPYGVEQGGWAYSSTLLIGLGIMCTYTSHILGKCLRRYPTKLRSYADIGGQAFGSKGRILVSTFIYMEIFMALISYTISLHDNLITVFLGTTLKLNLAKLSTSQLLTIVAVFIALPTMWIRDLSSISFLSTLGILMSVVIFVSLAAAAVFGGVLTNHSIPVFQMHNIPSISGLFLFSYGGHIVFPNIYKAMKDPSKFTKVSIVSFTIVTALYMIIGFLGAKMFGPNVNSQFTLSMPPKQIITKIALWATVLTPMTKYALEFAPFAIHLEHRLPSSMSGRTKMVIRGCAGSIFLLIILALALSVPYFEHVLSLTGSLVSAAVCLILPSSFYLKIFWGQIAKPLLLLNFFLIILGFFLGVMGTISSSRSLVESFQAHHSS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00183 388 Pfam Transmembrane amino acid transporter protein 3 372 IPR013057 -
Aip04g00183 388 PANTHER AMINO ACID TRANSPORTER AVT1H 3 384 - -
Aip04g00183 388 PANTHER OS05G0424000 PROTEIN-RELATED 3 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00183 Aip-Chr4 2100993 2103116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00183 2 386 Amino Acid or Auxin Permease AAAP Family AT5G16740 61.299 3.37e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00183 - - adu:107482339 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00183 04 2100993 2103116 Aip04g00183 04 2100993 2103116 ECH