Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00166 ATGACCGTCGAGAACTACCACGTCATCGAGCTCGTCGGCGAGGGTTCCTTCGGGAAAGTCTATAAAGGGAGGCGCAAACATTCCGGTCAGACTGTTGCGATGAAGTTCATAATGAAGCACGGTAAAACCGAAAATGATATCCACAACCTCAGGCAAGAAATCGAGGTAATTTGTACCCTAATTTCTACTCATGTTGAAGTAATGTATATACTGTGCATTTCATTTGAAAGTCCACAAGAGTTTTGTGTTGTCACAGAATTTGCTCAAGGAGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAACAACTGGTAAAAGCGTTACATTATTTGCATTCCAACCGAATCATCCATCGTGATATGAAGCCGCAGAATATTCTCATTGGTGCTGGATCTGTTGTCAAGCTATGCGATTTTGGTTTTGCACGAGCAATGTCCACAAATACAGTTGTCTTGCGATCCATAAAAGGAACTCCTCTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACACCCACACTGTTGATTTATGGTCTCTCGGTGTTATATTATATGAGTTGTATGTTGGCCAACCTCCTTTTTACACAAATTCTGTGTATGCTCTCATCAGACACATTGTCAAGGATCCAGTTAAATATCCAGAGAGCATGAGTCCCAGTTTCAAAAGCTTTTTGAAGGGCCTGCTAAACAAGGCACCTGAAAGTCGTTTAACTTGGCCTGCACTTCTTGAACACCCATTTGTTAAAGAGACTTCTGATGAACTTGAAGACAGGGTACCTAATTCATCTTTATTTCAGTGGTATTTCCATAGTGGGCAAGTTGTTCCTTGTTGTAACTATCCCAAGTCTGGTTTGTTGGAGCATAATTCTTCTCCACTTGAGAATAAAGCTCTGTTAAAGAGCCCTAAACCAGACAAGGAGAATTCATTAGTTCCTGATGAGTCCCCTGGAATCTCAAATCAATCTGCTATAATAGAGTCAGGTTGCCAAAGATTGGATCAACTTGAAAATAACTCTCGAACAGTCAAAGGTGCAAAAATAATTGGTCAAGATAGTGAAGCTTTGGGGCATATTCTTCTACCACTTAAAAAGTGGTCAAATGGATCTCAAAATATTTGCAGTGATCAAGTACTCATTGAGGCAAACCAATCACTAAGGATTGTTTCAAATCTTGTTGCGGCTGGTGTGCTAAGTCTTAGTGGGAAAATGGATGAACTTATAACTGAAATTCTTCTATTCATTGGGTCTGTTCTAAGCGTGAAATCCTCTGAACTTGTAGACTTGATAGCAAAGGGTTTCTCCATCACAAAAGTTTTGCTAGAAAACTATGGGGCTTGCACTTCAAGTTCTTACTTCAGGCACTGGGTTGCAATTGTTGAAATTTATTCTCAGGTAATTGTAACTTCAAGCAGTGAAGCATCTGGAAGGGTACTGTCTGAGTCTAGTGCGTGCATTACAGTCATGCTATCTAGAGTTGTTAAGGTGCTTAGATCATCTCAAATTTTGGATCCAGATACACATAATGAAACTGTTGGTAGAGTCTTAGAACATGCTAAAACATCTGGTCTAGTAGACAATTTGTGTCTGTGCTTAGCCACTTCAGGTTCGAGTCTCATCTCAGGCTCTTCGAATATGCTACGGGCTGCTACTGAAGCATGCAGGGCTGTCTGGTCTTTTATTAATGCACTGGATATATACTTTATGAAAAAGAGTTCCCCTTTGTTTCCCATAAACGCTTTGTGGAATCATTCGTTGAATAGGAAGCAAATTATGGATCATGGGCGAAGTCCCTTGGCTGTTACAGATACCGCCCAAATTGTTGATGCAGTAACGAGAGCATACTTGAGATCTAAAGCTGTACAAGTTGCTGTTTACTATTGTTTTCACCAGCGTATTGAGTTTGCCATGAATTGTAGTCTCCAGCTTTTGTCAAGGTGCTGCATACACAGCGGTACTGTTGCAGCTCTCCTTTGTGGTCTACCTACTACCCTTCCGGTGACTACTCTTGTTAGTGGTGGTGGTGATGGTACTATTATTTCAGAGATATTCTCTGTTTTGTCATTATGTATTAACTCTGCTAACAAAGATGCACAGAGTGGGGAACCGAATAATATTCAGTGCAAATTATCATATCCCTCTGCTTTGGTTCGTCATTCATGTCTCACTCTTGCAATAATTGCACAATGCTTAAAGTCAACTGGACGAAATTCAGCAATTTTTATGCTGACTACCTCACATAAGAAGCAGTTTGCTAGACTATCATGTCTAGCCCATCATATGTCTTCAGATGACAAGGCAAAAGCTTCTCAAACTGCATCAGCATTTTTGGCTCTGGCGTCCATTTTATTTCTTGAATCTGGGGCTTCAGTTGAGTCTCAAATAGCTGACATTGCTATGCCTTTAATCCCTCGAACTTTTGCTCTGTGTGACCATCTTAAAATTTCTTCTTGCAAAAAGAATGACAATGAATTGGATCCTGACTACCTAAGTGGGAAGCTTTCATATTGGCAAGGGGTAAGAGATGGATTTGTTGGTCTATTAGATTCCAGACTGAAATGGGGAGGACCATTAGCTGTTCAGCAGTTTTGTGCAAGTGGTATCCCTCTTCTTCTTATTGGCTTATTAGGCAATGATGTTTTAAATGAGGCACATGGAAATGAGTGCCTGAATGATAGAGTTGGATTATCTCCAGTTGGGGTTGTATGGACTATTTCTTCGATCTCTCACTGTCTTTCAGGCAGTGCTTTGACTTTTCGCCATATTTTAATTAGAACTGAACACATTAAGCTCATCACCAGCTTGATATGTGATGTTCATATTAAGTTAGTAAAAGGCTGGATTGGACCTGGTGGAGGACGAGCAGGAGTAAGAGAACTAATAAATGCAGTAGTAGATCTCTTAGCATTTCCTTTTGTTGTGCTGCAAAATGCCCCTGGCCTGCCATCATCAGCCACTGCTTCTGTGAACAGTGGGTTTCTACTCAACATTGGTTCACCTGGTCAGAGAGTCTGCTTGGAGGACAAGGATATGGTTAAGGCCATACAAGAAGACATGAACAAATACATTAAGATCCTTGTGGATGTGGGTGTGCCTGTTATTATCCTTCGATGCCTAGATCATATGGAGTTGGCTGACTTGGGCAGACCTGTTGCCTTCCTTGCCAAAATGGTATTCCACCGGCCTTTAGCAATTCAACTTGTGAGTAAAGGACTTTTGGAACCAAACAGGATGAGAAGGTTATTTGATTGTTCAGGCCCAAAAGAAGTTACACTGGACACACTAATGATAGTTTCTGATCTTGCTCGCATGGACAAGCGATTCTATGAGTGTATCCAAGGTGCTTCTATTTTGGAGTTCTTAAAAGATTTTCTTTCACATGAAGATCCCAATTTCCGTGCCAAAGCTTGTTGTGCTCTTGGAAATATGTGTCGTCATAGCGCCTATTTTTACAGTTCATTTGCAAGGCACCAAATTGTTGGCCTCCTGATCGATAGGTGCTCTGATCCTGACAAAAGGACACGAAAGTTTGCTTGCTTTGCAATTGGAAATGCGGCTTACCACGATGATACATTGTATGAAGAGCTGAGAAGATCTATTCCTCAGTTGGCTAATGTACTGCAGATGGCAGAGGACGACAAGACTAAGGTAAATGCAGCAGGTGCACTCAGCAATTTGGTTCGACACTCTGACAAGCTTTGTGAAGAAATAGTGTCCAAAGGAGCGATTCAGGTGAAGTTCTTGCTGCAGTTTATTACTGTTTCTAAATTTTTGTGA 3807 0.4108 MTVENYHVIELVGEGSFGKVYKGRRKHSGQTVAMKFIMKHGKTENDIHNLRQEIEVICTLISTHVEVMYILCISFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYTHTVDLWSLGVILYELYVGQPPFYTNSVYALIRHIVKDPVKYPESMSPSFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDELEDRVPNSSLFQWYFHSGQVVPCCNYPKSGLLEHNSSPLENKALLKSPKPDKENSLVPDESPGISNQSAIIESGCQRLDQLENNSRTVKGAKIIGQDSEALGHILLPLKKWSNGSQNICSDQVLIEANQSLRIVSNLVAAGVLSLSGKMDELITEILLFIGSVLSVKSSELVDLIAKGFSITKVLLENYGACTSSSYFRHWVAIVEIYSQVIVTSSSEASGRVLSESSACITVMLSRVVKVLRSSQILDPDTHNETVGRVLEHAKTSGLVDNLCLCLATSGSSLISGSSNMLRAATEACRAVWSFINALDIYFMKKSSPLFPINALWNHSLNRKQIMDHGRSPLAVTDTAQIVDAVTRAYLRSKAVQVAVYYCFHQRIEFAMNCSLQLLSRCCIHSGTVAALLCGLPTTLPVTTLVSGGGDGTIISEIFSVLSLCINSANKDAQSGEPNNIQCKLSYPSALVRHSCLTLAIIAQCLKSTGRNSAIFMLTTSHKKQFARLSCLAHHMSSDDKAKASQTASAFLALASILFLESGASVESQIADIAMPLIPRTFALCDHLKISSCKKNDNELDPDYLSGKLSYWQGVRDGFVGLLDSRLKWGGPLAVQQFCASGIPLLLIGLLGNDVLNEAHGNECLNDRVGLSPVGVVWTISSISHCLSGSALTFRHILIRTEHIKLITSLICDVHIKLVKGWIGPGGGRAGVRELINAVVDLLAFPFVVLQNAPGLPSSATASVNSGFLLNIGSPGQRVCLEDKDMVKAIQEDMNKYIKILVDVGVPVIILRCLDHMELADLGRPVAFLAKMVFHRPLAIQLVSKGLLEPNRMRRLFDCSGPKEVTLDTLMIVSDLARMDKRFYECIQGASILEFLKDFLSHEDPNFRAKACCALGNMCRHSAYFYSSFARHQIVGLLIDRCSDPDKRTRKFACFAIGNAAYHDDTLYEELRRSIPQLANVLQMAEDDKTKVNAAGALSNLVRHSDKLCEEIVSKGAIQVKFLLQFITVSKFL 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00166 1268 CDD STKc_STK36 4 259 - -
Aip04g00166 1268 ProSiteProfiles Protein kinase domain profile. 6 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00166 1268 PANTHER PROTEIN KINASE RELATED 1 1254 IPR045193 GO:0004674
Aip04g00166 1268 SUPERFAMILY ARM repeat 1028 1254 IPR016024 -
Aip04g00166 1268 Gene3D Transferase(Phosphotransferase) domain 1 1 283 - -
Aip04g00166 1268 Coils Coil 1203 1223 - -
Aip04g00166 1268 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Aip04g00166 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Aip04g00166 1268 MobiDBLite consensus disorder prediction 306 330 - -
Aip04g00166 1268 Gene3D - 1065 1265 IPR011989 -
Aip04g00166 1268 SMART serkin_6 6 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00166 1268 SMART arm_5 1199 1238 IPR000225 GO:0005515
Aip04g00166 1268 SMART arm_5 1113 1155 IPR000225 GO:0005515
Aip04g00166 1268 Pfam Protein kinase domain 6 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00166 1268 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00166 Aip-Chr4 1806296 1818202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00166 3 248 AGC Kinase Gene Family AT3G08720 36.400 5.41e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Aip04g00166 Pkinase 3.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00166 K06228 - gmx:100792102 1865.89