Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00164 ATGAGAGGAATAATTGGGGTAAGGCTCCAAACCCCCACCATCTCTAATGCCACTAGGAACACTCTAGCACATTTTTCCACCTCTTCTGGTTTTGGTGGTGGCAGCGGCAGTGGTAGTGGTCGAGGTCGTGGAGGCTCTGGTTTGGGAGGACCATTTGGATTCAATGAGAAAGCTCCAGGAAAGCCCAATTTTGGTGATCCTAAATCTGAAGAACCAGAGTTGCCTTCTCCCCCATCTTCGGTTTCTGGTCGCGGACACGGTCGTGGTAGGCCAGCCCCTCCGTCAGGCATGCCTTCTTTCTCGTCATTCATGTCGTCCATAAAACAGCCATCTGCCGGTCGTGGTCGTGGTGGTCCGTTACCATCCCATATCCAACAAGATTCCCAGAAGCAGCCTGATTCTGAGCCAAAGAAACCCGTTTTCTTCAAAAGAGAGGAAGATGATGATTATGTTGGTGTTGATGCTGGTGCTGGTGCGTCTTCAGATGTTTTGCCACCAAAAACACCAATTTTTAGCAGTGGTGATGGTGAGAGTGATCAGAAGAACCTTCCTGGAGGCATAGTAGGTGTGTTGTCTGGCAGTGGACGTGGGAAGCCCAAGCAGCAGCCTGATCAAAGGACTCAAGTTTCCCAAGAGAATAGGCATATCCGTGCTCAACGAGCTCCAGGCACTGGTGGTGGTGGTGTTGGTGATCGTCGTGCTCCTGCTGATGCTGCACCATCTGATTCTGTGCGTAAGAGACAGCCAATGCAAAGTGTTGACGATGCAGTGAATGTTGCACGGAGGATTCTGTCGCAACGGGATAATGATGTTGCTGGAAGAGGAAGAGGTGGCTTTGGTCGAGGCAGGGGTGGAGGTCGGGGGAGAGGAGGATTTAGAGGGAGGGACTTGGAGGAAAGGGGTGATGGGGATAGGGATGAAGAGGATTACGCCTCAGGGCTATTTCATGGAGATGATGCAGACGGCGAGAGGTTTGCCAAGCGGGTTGGGCCTGACATCATGAATCAATTGACTGCAGGTTTTGAGGAGATGGCTAATAGTGTTTTCCCCTCACCATTGGAGGATGAGTATTTGGAAGCATTTGACACCAATTGTGCTATTGAATTTGAGCCAGAATATTTGATGGGTGAGTTTGATCAGAACCCCGATATTGATGAGAAAGAACCTATTCCACTTCGGGATGCACTCGAGAAGATGAAACCCTTCTTGATGGCATATGAAGGGATTCAAAGTCAAGAGGAGTGGGAGGAAATAATGGAAGAGACAATGGCGAGAGTTCCTTTGCTGAAAAAGATCGTCGATCACTACAGTGGACCAGATAGGGTAACTGCAAAGAAGCAAAATGAAGAATTAGAAAGAGTTGCTAGCACTCTTCCTAAAAGTGCACCATCTTCGGTGAAGCAATTTACTAACCGTGCTGTCATCTCTCTACAGAGCAATCCAGGCTGGGGGTTCGACAAGAAATGCCATTTCATGGATAAACTAGTTTGGGAGAAAGAAGAGTGCAAAGATCAGATCAAAGACATGGTGAAGAAGCCATGGAGAATCATTCCCAGACCTCTCCTTGAAACAATCCTTAACAACCACGCACAGCACCATCGCGTCCCCCAGCCTCTCATCCTCCACGGCCCCAGAGGCGTCGGAAAAACAACCCTCTTCCTCAACCGTTTGCTCACTGACTGGAACAAAGCTCCTCACTTCACCGGCTACGTCGACTTTGCGCAATCTGTTGAAGGCCACTGCTCCTCCCACCCGTGGGCGTCGTGGTCCAGCTGTCCGCCGCCTTCTATCTCCGACTGCCGGAAAAGCCTCGAACAATGCCTTGAGTCCATGGCTGAAAGAGGTGTCCGGATGGGCACCATCACCGCTCAGCAGGTATTTGCCACTCTCAGCAAATGGCACGGCCTCACCGGGGCTCTCCGCAGCGTGTTGCTCGCCGGCGGCAGTGCTTCGAAGTCCCCTGTCCCTAACAACAGGGCGGCCTCACCCGCAGTGCTGTGGGACCGGGCGATCTTTGCAATGTCCGCTCGCTGCGATGCCGCCGAGATAGACAGAATTTTAGGGTTCGGGGAGAAGGAGAAGGTTTCCTTGTCTGTGGAGGAGGCTTCTTATTTCAAGGAGGCGGTTGTGGCGCTGAAGCTGGCGAAGAAGGTGCTCGAGGTTCAGCAAGGGTGGAGGGCTAATGCCATTGCTCATATGAACCGGACTGGCGTGTTCTCAAGGAGTTTGACGCATTCTTCTACTGATTGGCCTTGTTTGTTGTTGGAGCTGTTATCACAAGCTGCTGAAGTGGACCATTTCCAGCCGAAGTTAGTTCTTAATAATATCGAAGTTTTAAAGCATGCTACTGTAAATGATGATATATCAGTTAGCGGACCACTGTATCATGATAGTCTGATATGGCGTATAATTGCTTTGGGTGCGAATGAGCGTATTCTGCCCGTGATCTTGGTGACATCTGACAGCTACTATTCATATGAAGCATTCTTGGATTTTATGCATGTTTCAACAGAAGGAAATCACTATCCAATTCTCGCCGAATCTGTTTATAAACTTGACTGTACACTCTACATTTTGACCTTTGGATGGACTCCACAGGAAGCTAAAATGCATATGGTCCCTGATTATTTCAGTCATAAAGAATGGAATGTAATTGCTGAGGTACTTGGGCCAAACCCTCGACATCTCTTTGAGCTTTATGCACTTAAGCAAAGTAAATATTACCAAAAGATAACGGAAGACAAGGCTAGTACTTTTGAGGATATTGTAGATGCATATTTAGCGTATTTGCAAATTACTGTCCTGAATCCGGCGATGGATAGAGCATTGGAGATCTTGCAAAAGTTTGCAATTGATGTATGCAATGGAGAGGTTTCAAAAGACAAATTACGTTTTGGTGCCCCTTGGAGGTGTCCACCACAAATTGATGATCCTATATTGCGCATGGAGTGGGCAAAGCTTCAGTTAATGGATTTCGTTCAAGCTCTTGTCAACACAGAATTTGGGGTTAATTACCGAATCGATTATAGCGAAGAAATATTTGACGACCCGTCTGCTGTTGCATTATTGGAGGTTGGGTTGCTTTATGCTCAACGGGATCCGCCCTTCCTTCGTCCAATATCTAGAGGAATTGAGAGGTGTATAGTGAGATGGTTTGTCCAGCAGCAGATGCAGCTGAGGTTCCCCAACAAGATTCAATTTTTGTGCCACAGAATAATTCGTGGACGTTACTATCGCCATTTGATGACTTATTACGGTGGACAACTCCTCACAGCAGTGGCTCAGGATGCAAATAACCAATTTTACGTGGTTGCCTACGGAGTAGCTAGCTATGGAACTAAGGAGTCCTGGAAGTGGTTTTTGACTCTGCTCCAAGAGGATTTGGGGGATGTGCAGACTCATGGTTGGAACTTTATGTCCGACCAACAAAAGTTGTTGCTGCTGGGTTGCGTTCTTTACGGCGCGGAATCTCAGTGCAGCAAGGGCTGTCCACTAGCTCTAGCTTCCTACTACATGTGGACAGGCTCCAACTTGACGTACGTTTCACAGATCATGAAATCCAACGTCCTCTCGGACCCAAACGGCATAGTCAACTACAACAAAGACACGATTCCCAACAAGGACAGTGTCCAAGCCTTCATAAGAGTCAACGTTCCGTTCCCATGCGACTGCATCAACGGCGAGTTTCTAGGGCACACTTTCAAGTACGATATCCAGAGCGGGGACACGTACGAGCATGTGGCGACTAACAATTACGCCAATTTGACGAACGTGAATTGGCTGAGGAAGTTCAACACTTATCCTCCTAACAACATCCCTAACACTGGAACCCTTAACGTTACCGTTAACTGCTCCTGTGGGAACAGACAAGTGGCGAATTATGGTTTGTTCATCACGTATCCACTTAGGCCTGGGGACACCTTACAGGCTGTGGCGAAGAATCAGAGTGTTGACGCTTTCTTGCTTCAGAAGTACAATCCCTCTGTCAATTTCAACCAAGGCTCTGGCCTTGTTTATATTCCAGGCAAAGCAGGTCTTGCTGCTGGGGCTATTGCCGGCATAGTCGTTGGTATAGTAGCTGGTCTTCTATTAGTGGCTGTTGGTATATATTTCGGATATTTCAGGAAAAAAAAGATGCAGAGGGAAGAATTGCTTTCACAAGACTCCAAACCAATGTTCAGACAAGATGGTAAAGATGAAACCTCGCGTAGTGCTGCTTATGAAGCTGCAGGGCCTGCTGGGCCTGGTACCATCACAGGCATAACAGTGGACAAATCAGTTGAGTTTTCATATGAAGAATTAGCAACTGCCACGAATAACTTCAATTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGTTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCAGAATTGAAAGTCCTGACACGTGTTCATCATCTAAACCTGGTGCGGCTGATTGGATATAGTATCGAGGGTTCGCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTGAGTCAGCATCTCCGCGGTTCTGGAAGAGAGCCACTGCCATGGGCTACCCGTGTTCAAATTGCGTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGATAAAAACTACCGCGGAAAGGTTGCCGATTTCGGATTGACTAAACTGACAGAAGTTGGAAGCTCATCACTTCCTACTGGTCGTCTTGTCGGAACTTTTGGATACATGCCTCCAGAGTATGCTCAATATGGAGATGTATCACCCAAAGTAGATGTGTATGCTTTTGGAGTAGTTCTTTTTGAACTTATTTCAGCTAAGGAAGCTATCGTCAAGACAAGCGAATCTGTTGCTGACTCAAAGGGCCTTGTGGCTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGTAAACTAGTGGATCCAAGGCTTGGGGAAAACTACCCTATTGATTCAGTTCGCAAAATGGCGCATCTAGCGAAAGCTTGTACACAGGACAATCCCCAACTGCGTCCGAGTATGAGATCCATTGTCGTTGCCTTAATGACACTTTCTTCAACTACTGATGATTGGGATGTTGGCTCCTTCTATGAAAACCAAAATCTTGTGAATCTCATGTCCGGAAGATAG 5223 0.47 MRGIIGVRLQTPTISNATRNTLAHFSTSSGFGGGSGSGSGRGRGGSGLGGPFGFNEKAPGKPNFGDPKSEEPELPSPPSSVSGRGHGRGRPAPPSGMPSFSSFMSSIKQPSAGRGRGGPLPSHIQQDSQKQPDSEPKKPVFFKREEDDDYVGVDAGAGASSDVLPPKTPIFSSGDGESDQKNLPGGIVGVLSGSGRGKPKQQPDQRTQVSQENRHIRAQRAPGTGGGGVGDRRAPADAAPSDSVRKRQPMQSVDDAVNVARRILSQRDNDVAGRGRGGFGRGRGGGRGRGGFRGRDLEERGDGDRDEEDYASGLFHGDDADGERFAKRVGPDIMNQLTAGFEEMANSVFPSPLEDEYLEAFDTNCAIEFEPEYLMGEFDQNPDIDEKEPIPLRDALEKMKPFLMAYEGIQSQEEWEEIMEETMARVPLLKKIVDHYSGPDRVTAKKQNEELERVASTLPKSAPSSVKQFTNRAVISLQSNPGWGFDKKCHFMDKLVWEKEECKDQIKDMVKKPWRIIPRPLLETILNNHAQHHRVPQPLILHGPRGVGKTTLFLNRLLTDWNKAPHFTGYVDFAQSVEGHCSSHPWASWSSCPPPSISDCRKSLEQCLESMAERGVRMGTITAQQVFATLSKWHGLTGALRSVLLAGGSASKSPVPNNRAASPAVLWDRAIFAMSARCDAAEIDRILGFGEKEKVSLSVEEASYFKEAVVALKLAKKVLEVQQGWRANAIAHMNRTGVFSRSLTHSSTDWPCLLLELLSQAAEVDHFQPKLVLNNIEVLKHATVNDDISVSGPLYHDSLIWRIIALGANERILPVILVTSDSYYSYEAFLDFMHVSTEGNHYPILAESVYKLDCTLYILTFGWTPQEAKMHMVPDYFSHKEWNVIAEVLGPNPRHLFELYALKQSKYYQKITEDKASTFEDIVDAYLAYLQITVLNPAMDRALEILQKFAIDVCNGEVSKDKLRFGAPWRCPPQIDDPILRMEWAKLQLMDFVQALVNTEFGVNYRIDYSEEIFDDPSAVALLEVGLLYAQRDPPFLRPISRGIERCIVRWFVQQQMQLRFPNKIQFLCHRIIRGRYYRHLMTYYGGQLLTAVAQDANNQFYVVAYGVASYGTKESWKWFLTLLQEDLGDVQTHGWNFMSDQQKLLLLGCVLYGAESQCSKGCPLALASYYMWTGSNLTYVSQIMKSNVLSDPNGIVNYNKDTIPNKDSVQAFIRVNVPFPCDCINGEFLGHTFKYDIQSGDTYEHVATNNYANLTNVNWLRKFNTYPPNNIPNTGTLNVTVNCSCGNRQVANYGLFITYPLRPGDTLQAVAKNQSVDAFLLQKYNPSVNFNQGSGLVYIPGKAGLAAGAIAGIVVGIVAGLLLVAVGIYFGYFRKKKMQREELLSQDSKPMFRQDGKDETSRSAAYEAAGPAGPGTITGITVDKSVEFSYEELATATNNFNLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNYRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTSESVADSKGLVALFEGVLSQPDPTEDLCKLVDPRLGENYPIDSVRKMAHLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 1740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00164 1740 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 1145 1740 - -
Aip04g00164 1740 SMART serkin_6 1441 1714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00164 1740 MobiDBLite consensus disorder prediction 25 323 - -
Aip04g00164 1740 SUPERFAMILY Protein kinase-like (PK-like) 1422 1712 IPR011009 -
Aip04g00164 1740 Gene3D Phosphorylase Kinase; domain 1 1426 1511 - -
Aip04g00164 1740 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1145 1740 IPR044812 GO:0019199|GO:0045087
Aip04g00164 1740 MobiDBLite consensus disorder prediction 130 151 - -
Aip04g00164 1740 Gene3D Transferase(Phosphotransferase) domain 1 1512 1731 - -
Aip04g00164 1740 Pfam Protein tyrosine and serine/threonine kinase 1442 1711 IPR001245 GO:0004672|GO:0006468
Aip04g00164 1740 ProSitePatterns Protein kinases ATP-binding region signature. 1447 1469 IPR017441 GO:0005524
Aip04g00164 1740 MobiDBLite consensus disorder prediction 289 323 - -
Aip04g00164 1740 ProSiteProfiles Protein kinase domain profile. 1441 1715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00164 1740 MobiDBLite consensus disorder prediction 198 217 - -
Aip04g00164 1740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1556 1568 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00164 Aip-Chr4 1770481 1799009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00164 1145 1740 Receptor kinase-like Gene Family AT3G21630 59.355 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip04g00164 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00164 - K13429 gmx:100777781 931.784