Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00161 ATGAGAGTACCAAGCTCTGTCCTCTGTTATTTCCTTTCCCTTCTTCTTGCCTGCTGTGCCGCAAAAAAGTCTTATGTAGTGTACATGGGAGCCCACTCACATGATCCAGCACATCTGTCTTCTCTTAATTTCGATCACGTCACGCACTCCCACCATCAGTTTCTTCAATCTTTCTTGGAAagTAGTTATGATGCAGCCAAAGAATCTATCTTTTACTCTTACACAAGGCACATAAATGGTTTTGCTGCAATCTTGGAAGAAGAAGTAGCAGCTGAGATCGCAAGGCATCCGAAAGTGATATCAGTGCTCGAGAATAGAGAGAGGAAACTACACACGACTCGGTCATGGGAATTCATGGGGCTGGAGCAAAATGGAGAAGTAACATCGAACTCAATATGGAAGAAAGCAAGATATGGTGAAGGTGTTATCATTGGAAACTTGGATACAGGGGTTTGGCCTGAATCTGAGAGCTTTAACGAGAAAGGGTTTGGACCGATTCCCTCAAAGTGGAGAGGAATATGTGATCATGGATCTGATCCTACCTTTCACTGCAACAGGAAGTTGATCGGAGCAAGGTACTTCAACAAAGCATTTCTTTCGGCTGTAGGAAAAGTGAATGGGTCAATAGAAGAGTATGAGTCACCAAGAGACATCGAAGGGCATGGGTCCCACACCCTCTCAACAGCTGCGGGCAACTTCGTTGCGGGAGTCAGTGTCTTTGGCCAAGGCTATGGCACCGCCAAGGGCGGCTCGCCCAAGGCACGTGTGGCGACATACAAGGTTTGCTACGGCGGCTACGGCTGCTTCGATGCGGATATGATGGCGGCCTTCGACATGGCCATCCACGACGGCGTGGACGTCTTGTCGGTGTCGATTGGTGGCCCTCCTTCTCCATTTTTCAATGACAGTATTTCCATTGGGTCCTTCCATGCCGCCATGAATGGCATTGTGGTTGTTTGCTCCGCCGGCAATAGTGGCCCTTTTGATGCTTCTGTTGTGAACCTTGCGCCTTGGCATATCACCGTTGCTGCCAGCACCATGGATAGGGCGTTCGCTAGTTATGTTGTCCTTGGCAACAACATCACCATTAAGGGTGAAAGTTTATCCGCTTCAAAAATGGCGCACAAGTTCTACCCAATCATTAAAGCTGCAGATGCTAAATTGGCTAGCGCAAAAGTTATAAATGCTGAGTTGTGTCTGGATGGAACACTAGACCCGAAGAAGGTGAAGGGAAAGATTGTGTTGTGCCTCCGGGGATCAAGTCCAAGAGCGGAGAAGGGAGAGGAAGCTCTTCTAGCAGGTGCCGTGGGAATGGTTCTTGCCAATGATAAGATCGATGGGAATGAAATATTAGCCGATCCTCACCTCCTTCCTGCCACTCATGTCAATTTCACTGATGGTCTCGCTATATTTGATTACATCAACTCCACCAAGTTCCCAGTGGCTTATATTACATATCCAAAGACTTTGTTACATACTAAGCCAGCTCCTTTCATGGCTTCATTCTCATCAAAAGGGCCTAATATCCTTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCAGGTGTGTCAGTTATAGCAGCTTACACAGAAGGCCAAGGGCCAACCAATCAGGAGTTTGACAAGCGTAGGATTCCTTATAACTCACTCTCAGGCACATCAATGTCTTGCCCTCACATTTCAGGCATCGTTGGATTGTTGAAAACCATGCATCCGTCCTGGAGTCCGGCGGCTATTAAGTCTGCAATCATGACCACGGCCACAACACTAGATAATGAGGCAGAGCCACTGCTAAATGCTACATATGGCAAGGCAACACCATTTAGTTATGGGGCAGGGCATGTTGATCCCAACAGCGCAATGGATCCTGGCCTTGTTTATGACACAAAAATCGATGATTACTTCAACTTCTTATGTGCTTTAGGCTACCACGAAAAACAAATTTCCTTGTTTTCAGAAGGTCATCACTATAAATGTGCAACGAATTTCAGTATCCTCAACCTCAACTATCCTTCAATCACAGTTCCAGAATTCCCTGGCTCACTCACACTCACAAGAACCCTCAAAAACGTTGGTGCTCCGGCTACATACTTTGCTCAAGTTCAAAACCCAAGCGGGATCACTGTTTCTGTCAAGCCTAACATACTGGAGTTCAAAGAGGTTGGTGAAGAAAAGATCTTTGAAGTAACCCTGAAGGGGAGGCAAGGAGAAGCAAGAAATAATCATTTCAAATTTGGAAAACTGATTTGGACAGATGGCAACCATTATGTGAAAAGTCCAATTGTCGTCAAGTCTAATTGA 2304 0.4614 MRVPSSVLCYFLSLLLACCAAKKSYVVYMGAHSHDPAHLSSLNFDHVTHSHHQFLQSFLESSYDAAKESIFYSYTRHINGFAAILEEEVAAEIARHPKVISVLENRERKLHTTRSWEFMGLEQNGEVTSNSIWKKARYGEGVIIGNLDTGVWPESESFNEKGFGPIPSKWRGICDHGSDPTFHCNRKLIGARYFNKAFLSAVGKVNGSIEEYESPRDIEGHGSHTLSTAAGNFVAGVSVFGQGYGTAKGGSPKARVATYKVCYGGYGCFDADMMAAFDMAIHDGVDVLSVSIGGPPSPFFNDSISIGSFHAAMNGIVVVCSAGNSGPFDASVVNLAPWHITVAASTMDRAFASYVVLGNNITIKGESLSASKMAHKFYPIIKAADAKLASAKVINAELCLDGTLDPKKVKGKIVLCLRGSSPRAEKGEEALLAGAVGMVLANDKIDGNEILADPHLLPATHVNFTDGLAIFDYINSTKFPVAYITYPKTLLHTKPAPFMASFSSKGPNILVPEILKPDITAPGVSVIAAYTEGQGPTNQEFDKRRIPYNSLSGTSMSCPHISGIVGLLKTMHPSWSPAAIKSAIMTTATTLDNEAEPLLNATYGKATPFSYGAGHVDPNSAMDPGLVYDTKIDDYFNFLCALGYHEKQISLFSEGHHYKCATNFSILNLNYPSITVPEFPGSLTLTRTLKNVGAPATYFAQVQNPSGITVSVKPNILEFKEVGEEKIFEVTLKGRQGEARNNHFKFGKLIWTDGNHYVKSPIVVKSN 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00161 767 SUPERFAMILY PA domain 405 482 IPR046450 -
Aip04g00161 767 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Aip04g00161 767 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Aip04g00161 767 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Aip04g00161 767 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Aip04g00161 767 Pfam Fibronectin type-III domain 668 764 IPR041469 -
Aip04g00161 767 CDD Peptidases_S8_3 109 589 IPR034197 -
Aip04g00161 767 Pfam PA domain 399 470 IPR003137 -
Aip04g00161 767 Gene3D - 639 767 - -
Aip04g00161 767 Pfam Peptidase inhibitor I9 24 111 IPR010259 -
Aip04g00161 767 Pfam Subtilase family 139 603 IPR000209 GO:0006508|GO:0008236
Aip04g00161 767 CDD PA_subtilisin_like 354 484 - -
Aip04g00161 767 ProSiteProfiles Serine proteases, subtilase domain profile. 115 622 - -
Aip04g00161 767 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252|GO:0006508
Aip04g00161 767 PANTHER PEPTIDASE S8 12 766 - -
Aip04g00161 767 Gene3D - 348 491 - -
Aip04g00161 767 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 12 766 - -
Aip04g00161 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Aip04g00161 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Aip04g00161 767 SUPERFAMILY Subtilisin-like 110 626 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00161 Aip-Chr4 1703457 1718535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00161 24 765 Subtilisin-like Serine Gene Family AT2G04160 60.561 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00161 - - gmx:100788007 1133.63