Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00152 ATGGCGTCGTTCTTCTCGAAGCCGGCGTTGATTCTCTCGTTCTTTCTGCTTTTCTTCCTCTTTCCTGCTCAATCCGCGGTGTTCAGCGTAGATCTGGGGTCCGAATCGCTCAAAGTTGCTGTCGTGAACTTGAAACCTGGTCAGACACCGATCTCTATCGCCATCAACGAGATGTCGAAGCGCAAATCACCGGCGCTGGTTTCCTTCAACTCCGGCAACCGTCTCCTTGCCGAAGAAGCCGCTGGCCTCACCGCTCGCTATCCGCAGGACGTGTACTCCCAAATCAGGGACCTCATAGGGAAACCCTACGGCTTCGCCAAGAAGTTTCTGAATTCAATGTACCTCCCTTTCGAGGTGAAGGAGGATTCCAGAGGCACAGTGAGCTTCGTGGTGGAAGGCGATGGTGGCGCCACTCAGTATTCCGCGGAGGAATTGGTGGCTATGGTGCTGGGCTATGCGGTGCATTTGGCGGAGTTCCACTCCAAGGTTCCGATCAAAGACGCCGTGATATCGGTGCCGCCTTATTTCGGGCAGGCTGAGAGGAAAGGGGTACTTCAGGCGGCTCAGTTGGCGGGGATTAATGTTCTCTCGCTGATAAATGAGCATTCTGGCGCTGCGTTGCAGTATGGGATTGACAAAGACTTTTCCAATGAGTCCAGGCATGTTGTTTTTTATGACATGGGTTCTGGCAGTACCTATGCTGCACTTGTGTATTTCTCAGCGTACAAGAGCAAAGAGTATGGGAAGACTGTGTCTGTGAACCAGTTTCAGGTTAAGGACGTACGCTGGAACGCAGAGCTGGGTGGCCAGAATATGGAACTCCGGTTGGTGGAGCATTTTGCAGATGAGTTCAATAAACAAGTTGGTGGTGGAATAGATGTGAGGAAATTTCCCAAGGCTATGGCAAAATTGAAGAAGCAGGTTAAGCGAACAAAAGAAATTCTTAGTGCAAACACGGCAGCTCCTATTTCAGTTGAATCACTTCATAATGATATAGACTTCAGGAGCTCAATAACCCGTGAGAAGTTTGAAGAGCTTTGTGATGATATTTGGGAACAATCTCTTCTGCCAGTGAAAGAGGTGATTGAGCATTCTGGCTTGTCAATGGACCAGATATATGCGGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAGCTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAACAACTTGATAGGCATCTTGATGCTGATGAAGCTATTGTTCTTGGTGCAGCGTTGCACGCTGCAAATTTAAGTGATGGAATTAAATTGAACCGCAAGCTAGGAATGATTGATGGTTCTTTGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTCTGAAGGATGAAAGCTCGAGGCAGTTACTAGTACCACGAATGAAGAAACTACCGAGCAAGATGTTCAGATCCGTTAGTCACAACAAGGATTTTGAAGTGTTGCTAGCTTATGAAAGTGAAAATCATTTACCACCGGGTGTCACTTCTCCTGAAATTGCAAAATACCAGATTTCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGAAACCTGTCGTCCCCTATCAAGGCAATTATACATTTCTCTCTAAGCAGAAGTGGAATTCTCTCTCTTGATCGGGCTGATGCTGTTATCGAAATAACAGAATGGGTGGAAGTTCCCAAAAAGACCCTGACCGTAGAGAACTCGACTATTTCATCGAACCTATCAACTGAAGCTGGTGCTAACAACAATTCCACAGAAAGCAGTGAAAAAATGGAAACTGATAGTGGGGGTAATACAACCGATAGGGAAAATTTGAAATGTGAGCTAATATACAGTATTTACTTTAACTTGTGGCAGATTGTTGAGAAAGATCCTGGAATGTCTCTGTCTAAAGATTTTCTTGCCGAAGCCAAAGGAAAATTGGAAGCACTAGACAAAAAAGATGCTGAAAGAAAAAGAACGGCCGAGTTAAAAAATAATTTAGAAGGTTATATATATACCACTAAGGAAAAGATTGATACTGTTGAAGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTACACAGATGGTGAAGATGCCAATGCTACTGAGTTTCAAGAACGTCTAGATATGTTGAAAGCTGTTGGTGATCCAGTTTTCTTTAGGTTAAAAGAGCTTACAGCTCGACCAGCTGCTATTGAACATGCCCAGAAATATCTCGATGAGCTGAAGCAGATTGTTCAAGAGTGGAAGGTAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGATGCGATTCTAGATGATGCTGAAAAGTTAAAGAAGTGGTTGGATGAAAAAGAGACTGAACAACAGAATATTTCTGGATTCAGTACACCAGCTTTTACTTCTGAAGAAGTACTTTTGAAGGTGTTTGATCTTCAAAACAAGGTTGCCAGTGTTAATAAAATTCCCAAGCCTAAGCCTAAAATTCAGAAACCTGTGAAGAATGAAACTGAGAGCAAAGTGCAGGAGGATTCGGGTAATTCTAACTCCACCTCAACTACCGGTGATCAATCCGGTGACAGTTCAGAAGGCACAAGTGATGAATTCGCTGACAATCAAGAAGGTCCAAGTGTTGAAAAGAATGATGAGCAAACAGAAGTTCATGATGAGTTATGA 2679 0.4412 MASFFSKPALILSFFLLFFLFPAQSAVFSVDLGSESLKVAVVNLKPGQTPISIAINEMSKRKSPALVSFNSGNRLLAEEAAGLTARYPQDVYSQIRDLIGKPYGFAKKFLNSMYLPFEVKEDSRGTVSFVVEGDGGATQYSAEELVAMVLGYAVHLAEFHSKVPIKDAVISVPPYFGQAERKGVLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVVFYDMGSGSTYAALVYFSAYKSKEYGKTVSVNQFQVKDVRWNAELGGQNMELRLVEHFADEFNKQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHNDIDFRSSITREKFEELCDDIWEQSLLPVKEVIEHSGLSMDQIYAVELIGGATRVPKLQAKLQEFLGRKQLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMIDGSLYGFVVELDGPDLLKDESSRQLLVPRMKKLPSKMFRSVSHNKDFEVLLAYESENHLPPGVTSPEIAKYQISGLTDASEKYSSRNLSSPIKAIIHFSLSRSGILSLDRADAVIEITEWVEVPKKTLTVENSTISSNLSTEAGANNNSTESSEKMETDSGGNTTDRENLKCELIYSIYFNLWQIVEKDPGMSLSKDFLAEAKGKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIDTVEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDMLKAVGDPVFFRLKELTARPAAIEHAQKYLDELKQIVQEWKVNKSWLPKERVDAILDDAEKLKKWLDEKETEQQNISGFSTPAFTSEEVLLKVFDLQNKVASVNKIPKPKPKIQKPVKNETESKVQEDSGNSNSTSTTGDQSGDSSEGTSDEFADNQEGPSVEKNDEQTEVHDEL 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00152 892 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 429 572 IPR029047 -
Aip04g00152 892 Gene3D Actin; Chain A, domain 4 268 353 - -
Aip04g00152 892 MobiDBLite consensus disorder prediction 843 873 - -
Aip04g00152 892 SUPERFAMILY Actin-like ATPase domain 27 213 IPR043129 -
Aip04g00152 892 Pfam Hsp70 protein 28 727 IPR013126 GO:0005524|GO:0140662
Aip04g00152 892 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 21 821 - -
Aip04g00152 892 MobiDBLite consensus disorder prediction 573 600 - -
Aip04g00152 892 Gene3D - 628 741 IPR029048 -
Aip04g00152 892 SUPERFAMILY Actin-like ATPase domain 219 421 IPR043129 -
Aip04g00152 892 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Aip04g00152 892 Coils Coil 740 760 - -
Aip04g00152 892 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 655 737 IPR029048 -
Aip04g00152 892 CDD HYOU1-like_NBD 29 419 - -
Aip04g00152 892 MobiDBLite consensus disorder prediction 874 892 - -
Aip04g00152 892 PRINTS 70kDa heat shock protein signature 26 39 - -
Aip04g00152 892 PRINTS 70kDa heat shock protein signature 372 388 - -
Aip04g00152 892 PRINTS 70kDa heat shock protein signature 168 188 - -
Aip04g00152 892 PRINTS 70kDa heat shock protein signature 404 424 - -
Aip04g00152 892 PRINTS 70kDa heat shock protein signature 58 70 - -
Aip04g00152 892 PANTHER HSC70CB, ISOFORM G-RELATED 21 821 - -
Aip04g00152 892 Gene3D - 214 401 - -
Aip04g00152 892 Gene3D - 30 419 - -
Aip04g00152 892 Gene3D - 93 148 - -
Aip04g00152 892 MobiDBLite consensus disorder prediction 573 593 - -
Aip04g00152 892 MobiDBLite consensus disorder prediction 823 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00152 Aip-Chr4 1570067 1580107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00152 23 546 Calmodulin-binding Proteins AT3G12580 28.411 1.78e-64 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00152 K09486 - gmx:100786898 1336.24