Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00108 ATGGAAGAAAACGTCATTGTTTCTCTCTCAAGATCTCACTTCCTCAACGTTAAACTAACGTATTGCCTCTCCCTCTCAAAACACAACACAAACAGAGAGGTGTTTTCTTCTCCCCCTACCCTCATCAATGGCGTTTGTGCGATTACTGTGGCCGTAACAATTTGGAAGGTGGAGACTCCTCCGAACTCTAAGGATGAGTTGGAGGAGGTTGATTCAGATGAGGTCTTTCCTGTGTTCAGAGAAGGAGGAAGGAACCTAACTGAGATCGAAGGAGGCATGGGTTGGAGATGTTGGTGTGTGGTTCTGGTTGTTGTTGTTGTTTTTCAACCCGTCATAGATTCTGCTTCTGCGAGCTCTATTGTTAAGAACCTACCTGGTTATGACGGCTATCTTCCATTCAACCTTGAAACCGGATATGTAGGGGTTGGGGAAGACGAAGCTGTGCAATTATTTTACTTGTTTGTGGAATCCGAAAGAAATCCTTTATTTGATCCACTTCTGCTGTGGTTTGTTGGAGGTCCTGGTTGCTCTGCACTTTCTGCATTCTTTTTCGAAAATGGACCTCTAAGAATGGATCAAAATTTCAGTGGAAATATCCCAAAACTTGAGCTGAACCCATACTCATGGACCCATATGTTGAGCATGTTATACATAGATATCCCAGTGGGCACTGGATTTTCTTACTCAAAAACGCAACAAGGTTACTATAGCAGTGACACATTATGGGTTGAGCATACCTATGCTTTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTCAACTCAAATCCATTTTACGTTGGTGGTGGCTCGTATTCAGGATATCCTACTGCTCCTCTCGTTCAAAAATTATATGATGGTTACGTAGCAGGTCGTGTACCACGCATTAATATCAAAGGTTATGTGATTGCAAGCCCAGGGGTGGACGCATATGAGAGCGAGAACACGAAAGTGTTGTATGCATACCAGATGTCTCTCATACCAGAATCACTCTATCAGTCGATAAAAGAACATTGTGGTGGTAATTATGTAAATATTGATCCAGAAGACACAAAGTGTCTTATGGATTTGCAGTTAGTTCGTTACATAAATCCACAACAAATTTTGGAACCTTTGTGTGAAACGACACCTGGTGTGAATCATGGAATTTTACAATCCTCACTTCAACATCGTTCAGAATTTTGGTGTAGAAGTTATTCTCACATTCTTGTGAACACATGGGCAAATGATGAAAGTGTGAGGAAAGCCCTGTACATTAGAGAGGGAACAAAGGGAGAGTTCTTGAGATGCAACAAGACTTTGGCATATAACGTGACTCTACTCAGCGTTGCAGGATATTATCAAAATTTGACCAAGGCCAATATCCAAGCTCTAGTTTACTGTTCTGATCTTGATATGTCAATACCACACATAGCTACACAAAATTGGATAAAGTCATTAAAGCTTAGCATATATGACAAGTGGCGTGCATGGTTTGTTGATGGTCAAGTGGCCGGATTCACGGAAATTTACAAAATGAAAGAAGACCATTACTTAACATATGTGTCAGTAAAGGGTGCTGGACATGTAGCCCAGACATTTAAACCCAAGGAAGTTTACCATATGATAAAGAGGTGGTTTTCATATTCTCTTATATAA 1638 0.4066 MEENVIVSLSRSHFLNVKLTYCLSLSKHNTNREVFSSPPTLINGVCAITVAVTIWKVETPPNSKDELEEVDSDEVFPVFREGGRNLTEIEGGMGWRCWCVVLVVVVVFQPVIDSASASSIVKNLPGYDGYLPFNLETGYVGVGEDEAVQLFYLFVESERNPLFDPLLLWFVGGPGCSALSAFFFENGPLRMDQNFSGNIPKLELNPYSWTHMLSMLYIDIPVGTGFSYSKTQQGYYSSDTLWVEHTYAFLQKWFIDHPKFNSNPFYVGGGSYSGYPTAPLVQKLYDGYVAGRVPRINIKGYVIASPGVDAYESENTKVLYAYQMSLIPESLYQSIKEHCGGNYVNIDPEDTKCLMDLQLVRYINPQQILEPLCETTPGVNHGILQSSLQHRSEFWCRSYSHILVNTWANDESVRKALYIREGTKGEFLRCNKTLAYNVTLLSVAGYYQNLTKANIQALVYCSDLDMSIPHIATQNWIKSLKLSIYDKWRAWFVDGQVAGFTEIYKMKEDHYLTYVSVKGAGHVAQTFKPKEVYHMIKRWFSYSLI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00108 545 Gene3D alpha/beta hydrolase 114 382 IPR029058 -
Aip04g00108 545 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 106 543 IPR001563 GO:0004185|GO:0006508
Aip04g00108 545 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 106 543 - -
Aip04g00108 545 Gene3D - 396 543 - -
Aip04g00108 545 SUPERFAMILY alpha/beta-Hydrolases 121 541 IPR029058 -
Aip04g00108 545 Pfam Serine carboxypeptidase 125 541 IPR001563 GO:0004185|GO:0006508
Aip04g00108 545 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 217 IPR001563 GO:0004185|GO:0006508
Aip04g00108 545 PRINTS Carboxypeptidase C serine protease (S10) family signature 253 278 IPR001563 GO:0004185|GO:0006508
Aip04g00108 545 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 228 IPR001563 GO:0004185|GO:0006508
Aip04g00108 545 PRINTS Carboxypeptidase C serine protease (S10) family signature 512 525 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00108 Aip-Chr4 1081076 1112670 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00108 403 541 Calmodulin-binding Proteins AT2G22960 41.007 5.48e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00108 K16296 - qsu:112035786 475.707