Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00106 ATGGATCGAAATATGAGTGGAAATATCCCAAAACTTGAGCTGAACCCATACTCATGGGCCCATATGTTGAACATGTTATACATAGATATCCCGGTGGGCACTGGATTTTCTTACTCAAAAACGCAACAAGGTTACTATAGCAGTGACACATTATGGGTTGAGCATACGTATGCTTTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTCAACTCAAATCCATTTTACGTTGGTGGTGGCTCGTATTCAGGAACTCCTATTGCTCCTCTCGTTCAAAAATTATATGATGGTTACGTAGCAGGTGGTGTACCACGCATTAATATCAAAGGATATGTGATTGCAAGCCCAGGGGTGGACCTATATGAGACCCTGAACTCGAAAGTGTTGTATGCATACCAGATGTCTCTTATACCAGAATTACTCTATCAGAGTTATGATCACATTCTTGTGAACACATGGGCAAATGATAAAAGTGTGAGGAAAGCCTTGTATATTAGAGAGGGAACTAAGGGAGAGTTCTTGAGATGCAACAAGACTTTGGCATATAACATGACTCTACTCAGCGTTGCAGGATATTATCAAAATCTGACCAAGACCAACATCCAAGCTCTAGTTTACTGGTTAACTTCTTATATTATTAATCTGACTATATCACGTGTATATTAA 666 0.3889 MDRNMSGNIPKLELNPYSWAHMLNMLYIDIPVGTGFSYSKTQQGYYSSDTLWVEHTYAFLQKWFIDHPKFNSNPFYVGGGSYSGTPIAPLVQKLYDGYVAGGVPRINIKGYVIASPGVDLYETLNSKVLYAYQMSLIPELLYQSYDHILVNTWANDKSVRKALYIREGTKGEFLRCNKTLAYNMTLLSVAGYYQNLTKTNIQALVYWLTSYIINLTISRVY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00106 221 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 144 205 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 Pfam Serine carboxypeptidase 10 146 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 PRINTS Carboxypeptidase C serine protease (S10) family signature 28 38 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 PRINTS Carboxypeptidase C serine protease (S10) family signature 15 27 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 PRINTS Carboxypeptidase C serine protease (S10) family signature 63 88 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 144 205 - -
Aip04g00106 221 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 146 IPR001563 GO:0004185|GO:0006508
Aip04g00106 221 Gene3D alpha/beta hydrolase 2 145 IPR029058 -
Aip04g00106 221 Gene3D alpha/beta hydrolase 146 207 IPR029058 -
Aip04g00106 221 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 5 146 - -
Aip04g00106 221 SUPERFAMILY alpha/beta-Hydrolases 7 207 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00106 Aip-Chr4 1041543 1049810 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00106 153 206 Calmodulin-binding Proteins AT2G22960 38.889 1.22e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00106 K16296 - gmx:100791997 173.711