Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00105 ATGCAGCGGGGAGAGAGGAAGATGGATCCACGACCGATCACACGGTGCGGGTGTGAAGCTCGGATTAAGGTGCACGTTGATGATACCAGTGGGCGATGGTTTGTTGAACAATTCTGTGATAACCATAATCATCCCATGCTGGATTCCAGGTTTAGGGGTCTGATGCAGTCACACAGAGCAGTCAAGGAAGGCGCGATAGATGCTGAGGCCGCGTTGAAGTTCTTGGCAACTTTAAGGACTACCGATTGTGGAATGTTCTGGAAGTACTCGTTGGATGGTGAGAAGAGGCTGGAAAATCTTTTCTGGTGCGATGGTACTAGTCGTTATGACTACAATGTGTTCGGAGATGTCCTGGAATTTAACGCAACATACGGTCGTAACAAATACAAGTGTCCGTTGGTGAACATGTATTCCTCCAGGAACAAGGGCAAGCGACCTGCAACAGGCACTCAACGAAACCAACAACACCTACGACTGCATTTTCTGAAGCCAATCATAAGGCCCGCCTGCTTCAAACTGGTCCTCCCGATCGGACCAGACGAACTCTCGAACTGGACCCCCTACATAAACCTGGTGGTCCCTGATGGAAGGGATATCGGCTTTCGGGCAACTCTGACTTCTAAGTACGTATCTTCGACTTCGGTGGCCGCAAAAACACATACCAGCCCCGAACGTTCGAGGAACCGCCGTAGGAAAAGAAAGCCAAATGTCCTTCATCTGAGCCATTTCACTAGTCAGAGGCACACACTCATCCTTGCACACGGCCACATTGAGATGGAGGCCACCTACACCAAATTTAGTGGGAGACGTGACGGTAGCTTTGGGGTCATCTCTGGAGGCTGGGCAGACTTCGCTACCCTGTGCAAATTCGAGCCCGGAGGTGTGGGGATCTTCGAAGTCATCTCAACTGAGCCAGTCACAGTACTGCAGGTCCGATGGTGCAACGAAGCTGCGAGATGCTGA 963 0.5119 MQRGERKMDPRPITRCGCEARIKVHVDDTSGRWFVEQFCDNHNHPMLDSRFRGLMQSHRAVKEGAIDAEAALKFLATLRTTDCGMFWKYSLDGEKRLENLFWCDGTSRYDYNVFGDVLEFNATYGRNKYKCPLVNMYSSRNKGKRPATGTQRNQQHLRLHFLKPIIRPACFKLVLPIGPDELSNWTPYINLVVPDGRDIGFRATLTSKYVSSTSVAAKTHTSPERSRNRRRKRKPNVLHLSHFTSQRHTLILAHGHIEMEATYTKFSGRRDGSFGVISGGWADFATLCKFEPGGVGIFEVISTEPVTVLQVRWCNEAARC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00105 320 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 62 IPR031052 GO:0006355
Aip04g00105 320 PANTHER OS02G0262500 PROTEIN 65 134 - -
Aip04g00105 320 PANTHER OS02G0262500 PROTEIN 6 62 - -
Aip04g00105 320 Pfam FAR1 DNA-binding domain 5 47 IPR004330 -
Aip04g00105 320 MobiDBLite consensus disorder prediction 214 236 - -
Aip04g00105 320 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 134 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00105 Aip-Chr4 1022452 1025516 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g00105 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00105 - - ahf:112777976 222.246