Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00100 ATGGCCATGGAAGAGAACAATGTGGTGGTGATCCAAGATGCGTCGAAAGAGCTTCATACGAGAGTGTTTTCGTGGGCTATCGATAGCGGCTTAGCACTGAAGGCAGCAGATAAGGTCACTCTAGTTTCAATCATGCATCAGATACACACTCCTATGGGATATTATTGCAGTGTACATGGACTAAATAGGAGGATTGTGGCCGAAGAAGCCGCGAGGAAGATGGAAGAGTATCTTCAGAATGATGAGCTTGCTCAGATTGCTAAACTTTATGAATCAAATGAGGTTGCATTTAAAATTCAGTTGGTTACAGGATCTCCATTAAAGGAGCTTGCTTTAAAAGCAGCCATTAACCTAAAGGCAACTTGGCTTATACTTGACAGGCAACTGAAGAAAGATGCAGAGTTTTTCCAGCAGAAGCTTTCTTGTGGTATATCAAGATTAAAGCGTAACAATCGGATCGTACACCTACGAGCCCCTACTGATATCCCCACAGAGATTCAATGTAGCAGCCATGAAACATTTGATCAAAGTTTACCAGAACCAACATTTGAAGATCTCTTCCTCACTGTTGATGATTTCAATAAGAGTAATGCTGAAATATATGTTGATGAGTCGAGCCGGAGTCGAATACAAGGCAGGTGCCAACGCCGAAAGGCCACCAACACACTTCTTGTGACTAACAGGGAAGAAATAAACAATGATGAAGAAACAGGTGAAATAGAAAGAGAGAAGCAAAGAGAGGATGATGAACAGATACAAAGCATGCTCCATGAGGAGGAGATGGACACAACAGTTGTAACTAACAATGATGAAATAACAGCTCATGACATAGTCCAACAGCCAAGCCGGGACAAAGAGCAGACACAGAACTTGTTCCATGTTGAGGCTTGGAGCTTAAGGCATCCATCAAACATCTATGAAATGAATGAGATTGATCAACCAAGTGACAAGGAAAGCGCTTCAGAAGAGCTGTTATGCTCTATCTGCAAAATCAGACGGCCTAATATCGAATGGAAAAAGGAATTCACATATGAAGAACTCCAAAATGCCACAGATGGATTCTCATTGAAGAACTGTCTCTCTGAAGGTGGCTATTTGTCTACTTTCAAAGGCCAGCTAGAGGGCGAGTTGAAAATAGTAATTAAGCAGCATGAGATAAGAAGTTCTCAGGAAAGGGAGAAAATCCAATCCGAAGTTCGGTCTACTCTCAAAGTTAGACATAAGAATGTGGTCATGCTGTTGGGTTTAACCACAGAAGCAAGCTTCCTATTGACCGTGTCTGAGTATGCCTGCAACGGTTCACTCGAGATGTATCTATCAAAGGAAAGCAGCAGATCTTTGACTTGGAGAGAAAGGAAGAAAGTGGCAATAGGTCTTGCAAGAGGTCTAAAGTACCTACATGAAAATAGCATAATTCATGGCAATGTTAAACCAAGTAACATTCTTCTGACACATGAATTCAACCCACTGATTGGAGATTTCGGATTCGGTAAAAAGATTGACTTCAGGAAGTTCAACAAAGATAAAAGTGTAAATTCTGACTACATAGCACCAGAGCATCAGGAGAGGGGAAAACTATCAACTAAGGCTGACGTGTACTCGTTCGGAGTGGTTCTGCTAGAGCTGATCACCGGACGTAGGGTTAAAGGTCACTCTGCAGATAAAAGCCTTGTTGGATGGGCCAAGCCTCTTCTTAAGGGAAAGCAGTACACACAACTTGTAGATCCCACTCTCAGCAAGTCATATGAGGAGGAAAAGCTTCAATGGCTGGTCCAAGTAATAGATCAATGTCTTAAAAAGAGTCCAAAGGATAGAATGTCCATGAATATGGTTGTTTCTGCATTGCAAGACTTAGAAGATAGCGAACAACACTGCATCATAGACGAACTTACTCCAGGTAATTCATGCAATCAGAATTGTCCAACAGAAAATAATCAGCCAAGCAAAAAACCAGAACAGACAGAGAGCAGGTCCTACATTGAAAAAGGGAGGTTAAAACTAATAGTTGAAAATAACAATTTCTACAAAACAAGCCAGGAAAACTCTGATCACCTGAACCAGGTTGAAGAACAGATGCAAAGCAAGTCTGTAGCAGAGGAAAGGAGTCATCAAAAGATGATAAACTATGAACACATGATGGATCAGACAGTTGTTGATCAGCTGAATCATTATCAAACAAAAGTAGATCGGGCGAACCAGAATAAAATACAATCACAAAGCTGCTCAAGTGAGAATTTGTTTGCTGGATATCAAAGTGAAGCCATTTTGGAGAATTTGAAATCCTCTAAATGCTCTATTTGCAAAAGTAAACGGCCAAATATTTCATGGCAAAGAGACTTTACTTATGATGAACTCCTCGAAGCTACCGAAGGATTTTCAATTAAGAACTCCCTATCTGAGAGTAAAGATGGACCAACTTTCAATGGATTGCTAGAGAGCAAGATAAAAATAGTGGTTAAGAAATATCAAATCACTAAGCCCCAGGAAGAGAAGATTTTCAAGTCAGAGGCCGACCTGCTGTCCAAGGCTCGACACAAAAATGTGGTCATGCTCTTGGGAATATGTGCAGCTAAAAACCAATTAATGATTGTGTATGAGCAAGCATGCAATGGTTCACTTGACAAGTACCTGTCAAGAGGAAACTTCCAATCATTGACTTGGAGAGAAAGGATAAAAGTAGTAGTAGGTACAGCCAGAGGCTTAAAGCATCTACATGCGAATAATATAGTTCATGGAAGTATAAAGTCAAGTAACATTCTACTAACACATGACTTTGAACCACTGATTGGAGACTTTGGCTTTGCGAAAGTGAGGCTAGAAACAAAGAAATCATACAAGGGTAAGGAAGCAAGCAATTCTGGATATGCGGCACCAGAGTGCACAGATAGTGGGAAAGTATCAACCAAGGCAGATGTATACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCAGTGGCCGAAGCGCTGCAGACAAACTACCCGGAGGCAAAAGCCTCGTTGGATGGGCAAGACCCCTATTGGGAGGAAAGAAGCACCCGCAGTTGGTGGATCCAAATATCAGCAACTTCTATGAAGAAGAAGAATTAAAATGGCTGGTCCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGATAGATCTTCAATGAATATGGTTGTCTCTGCATTACAAGACTTAGCAGGTGCAGTTACAGACACAGATGAGTGCTGTTTTACTGAATATTCTTCCTCAGACATGCCATATTTAGCATATGGTGAGCCTTCATTGACTAGTTCATGCTGTCAAATAAAGGCTGATTCGATGATTCAAACACAAGAACAAATTCAGATCAAACCATGGATGGAGGAAAGAGACCTAAAGTTGGAGATTAAAACTCATGAGGTAATAGGTCAGAGTAAAGTTGAGCACCCAAGAAAAGATGGACAAAAGATGCAGAGCAACCCCCATGGGGAGGAGATTCCCAGAATGGTAGTATATCCTAATGACAAGACCCAGGAAGAAGAGGATATTATCGGAAGCTTCGATGTTGGGGAGATGTGTAAAATAGAAGTAGACAGACAACTAAAGGTGAGTGGGGATAAAAAACAAATGCAGGATATATCACTTGAGAATCAAGGTGAAACCATTTTAGAGAGTTCAGAAACCTCTTTATGCTCAATCTGCAAAAATAGATGCATAAATAATACATGGAAAAAGGACTTCATTTATGAAGAACTTGAAGCTGCTACAGATGGATTTTCAACCAAGAATTCTCTATGTGAAGGTGGATGTAGACCTGCTTTCAGAGGTCAGCTAGATGAGCTGAAAATAGTTGTTAAGCAATACTACATGACAGAGAATGTCTTGTCAGAAGTTGAGCTGCTTAGAAATGCTAGGCATGAAAATTTGATAAGGATATTCGGTTCATGCATACAAGAAAGTCAATTGCTGATTGTATATGAACATGCATGCAATGGTTCACTTGACCAGCACTTATCAAGAACAAGTGGCAGATCATTAACATGGACAGAAAGAATGAAAGTCGCAAAAGGTGTTGCTAAAGGTCTTAAGTATCTACACGACAATAACATAATTCATGGAAGGATAAAGCCAAGTAACATTCTTCTAGATCATGAGTTTAACCCTCTGCTTGCCGAATCTGTGTTCGGAAAAGGAAGATGTGAATTGAAGTACAACTGCAAGGATGAAAAAAGGGGGAATTGTGGATACATAGCTCCAGAGTATCAAGAAACAGGAAACTTAACAGATAAGACAGATGTGTATTCTTTTGGTGTAATTCTTTTAGAGCTGATAACAGGCTGTATGATTACAGAAGCAGCATCAGAACAGAAATGTCTTGTTGAATGGGCAATCCCACTTCTTAGAGGGAGGAAGTATGTACTGTTGTTGGATTCCAATATAAGCAGCCAATTTGATGAACAAGAACTGGATTTGTTGGTCCAGGTAATCGAAAAGTGCCTCCGAAAGAATCCGGAAGAAAGGTTTACTATGAATATGGTTGTCTCACTGCTGCAACATGATGCTGTTGTTACTAGCGAAAGCTGTGTAGCTAAAGAGTCCTCTTTATCAGAGAAGTCATGCTTTTTCTTATGTAATGCTTCAGATGCAACAAGCTCAAAAGCCAAGAAGGAATTGCCACCAGAGGAAGGTCTAATCAATGAGGTTGTTGAAGAAAGAGAGGACAACATAACTTGCAACGGAAGCAACCGTAAAACGAAGACGAGGGAAGAAAAGAAAATTATGAAAATAGAAAAGAAAGAAAGCTTAAGCACCAAGCTACATGAATGTAATGAATGGTGCTTGTTTTATGGTGGAGCCAGGCACTTTTATCTTCAAGGGGCTAAGGAATATAAAGTATGTCAAGAATTCTTTATTTTTAGTAATCAACTCATTTAA 4896 0.4013 MAMEENNVVVIQDASKELHTRVFSWAIDSGLALKAADKVTLVSIMHQIHTPMGYYCSVHGLNRRIVAEEAARKMEEYLQNDELAQIAKLYESNEVAFKIQLVTGSPLKELALKAAINLKATWLILDRQLKKDAEFFQQKLSCGISRLKRNNRIVHLRAPTDIPTEIQCSSHETFDQSLPEPTFEDLFLTVDDFNKSNAEIYVDESSRSRIQGRCQRRKATNTLLVTNREEINNDEETGEIEREKQREDDEQIQSMLHEEEMDTTVVTNNDEITAHDIVQQPSRDKEQTQNLFHVEAWSLRHPSNIYEMNEIDQPSDKESASEELLCSICKIRRPNIEWKKEFTYEELQNATDGFSLKNCLSEGGYLSTFKGQLEGELKIVIKQHEIRSSQEREKIQSEVRSTLKVRHKNVVMLLGLTTEASFLLTVSEYACNGSLEMYLSKESSRSLTWRERKKVAIGLARGLKYLHENSIIHGNVKPSNILLTHEFNPLIGDFGFGKKIDFRKFNKDKSVNSDYIAPEHQERGKLSTKADVYSFGVVLLELITGRRVKGHSADKSLVGWAKPLLKGKQYTQLVDPTLSKSYEEEKLQWLVQVIDQCLKKSPKDRMSMNMVVSALQDLEDSEQHCIIDELTPGNSCNQNCPTENNQPSKKPEQTESRSYIEKGRLKLIVENNNFYKTSQENSDHLNQVEEQMQSKSVAEERSHQKMINYEHMMDQTVVDQLNHYQTKVDRANQNKIQSQSCSSENLFAGYQSEAILENLKSSKCSICKSKRPNISWQRDFTYDELLEATEGFSIKNSLSESKDGPTFNGLLESKIKIVVKKYQITKPQEEKIFKSEADLLSKARHKNVVMLLGICAAKNQLMIVYEQACNGSLDKYLSRGNFQSLTWRERIKVVVGTARGLKHLHANNIVHGSIKSSNILLTHDFEPLIGDFGFAKVRLETKKSYKGKEASNSGYAAPECTDSGKVSTKADVYSFGVVLLELISGRSAADKLPGGKSLVGWARPLLGGKKHPQLVDPNISNFYEEEELKWLVQVTEQCLRKNPKDRSSMNMVVSALQDLAGAVTDTDECCFTEYSSSDMPYLAYGEPSLTSSCCQIKADSMIQTQEQIQIKPWMEERDLKLEIKTHEVIGQSKVEHPRKDGQKMQSNPHGEEIPRMVVYPNDKTQEEEDIIGSFDVGEMCKIEVDRQLKVSGDKKQMQDISLENQGETILESSETSLCSICKNRCINNTWKKDFIYEELEAATDGFSTKNSLCEGGCRPAFRGQLDELKIVVKQYYMTENVLSEVELLRNARHENLIRIFGSCIQESQLLIVYEHACNGSLDQHLSRTSGRSLTWTERMKVAKGVAKGLKYLHDNNIIHGRIKPSNILLDHEFNPLLAESVFGKGRCELKYNCKDEKRGNCGYIAPEYQETGNLTDKTDVYSFGVILLELITGCMITEAASEQKCLVEWAIPLLRGRKYVLLLDSNISSQFDEQELDLLVQVIEKCLRKNPEERFTMNMVVSLLQHDAVVTSESCVAKESSLSEKSCFFLCNASDATSSKAKKELPPEEGLINEVVEEREDNITCNGSNRKTKTREEKKIMKIEKKESLSTKLHECNEWCLFYGGARHFYLQGAKEYKVCQEFFIFSNQLI 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00100 1631 PANTHER OS01G0253100 PROTEIN 1190 1527 IPR045271 GO:0004714|GO:0006468
Aip04g00100 1631 PANTHER OS01G0253100 PROTEIN 81 194 IPR045271 GO:0004714|GO:0006468
Aip04g00100 1631 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00100 1631 MobiDBLite consensus disorder prediction 632 653 - -
Aip04g00100 1631 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 326 636 - -
Aip04g00100 1631 Pfam Protein kinase domain 1277 1501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00100 1631 PANTHER OS01G0253100 PROTEIN 712 1151 IPR045271 GO:0004714|GO:0006468
Aip04g00100 1631 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1190 1527 - -
Aip04g00100 1631 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 81 194 - -
Aip04g00100 1631 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 712 1151 - -
Aip04g00100 1631 SUPERFAMILY Protein kinase-like (PK-like) 774 1056 IPR011009 -
Aip04g00100 1631 MobiDBLite consensus disorder prediction 632 656 - -
Aip04g00100 1631 PANTHER OS01G0253100 PROTEIN 326 636 IPR045271 GO:0004714|GO:0006468
Aip04g00100 1631 Gene3D Phosphorylase Kinase; domain 1 1220 1315 - -
Aip04g00100 1631 Gene3D Phosphorylase Kinase; domain 1 329 429 - -
Aip04g00100 1631 SUPERFAMILY Protein kinase-like (PK-like) 1229 1504 IPR011009 -
Aip04g00100 1631 ProSiteProfiles Protein kinase domain profile. 1236 1509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00100 1631 Pfam Protein tyrosine and serine/threonine kinase 798 1056 IPR001245 GO:0004672|GO:0006468
Aip04g00100 1631 Pfam Protein tyrosine and serine/threonine kinase 356 615 IPR001245 GO:0004672|GO:0006468
Aip04g00100 1631 Gene3D Phosphorylase Kinase; domain 1 752 866 - -
Aip04g00100 1631 SUPERFAMILY Protein kinase-like (PK-like) 339 619 IPR011009 -
Aip04g00100 1631 ProSiteProfiles Protein kinase domain profile. 792 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00100 1631 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
Aip04g00100 1631 Gene3D Transferase(Phosphotransferase) domain 1 1317 1522 - -
Aip04g00100 1631 Gene3D Transferase(Phosphotransferase) domain 1 869 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00100 Aip-Chr4 978179 990629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00100 342 635 Trihelix Transcription Factor Family AT5G38560 38.636 2.82e-55 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip04g00100 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00100 - - ahf:112795554 3046.53